EnhancerDB
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  3. vista23459[chr16:87886258-87886670]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23459[chr16:87886258-87886670]
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Tissue distribution of vista23459
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Transcription factor that possibly regulate vista23459[chr16:87886258-87886670]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221259
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221260
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221261
chr16 87886240 87886260 RREB1 JASPAR yes 12247226
chr16 87886240 87886260 RREB1 JASPAR yes 49415464
chr16 87886242 87886262 RREB1 JASPAR yes 12247227
chr16 87886242 87886262 RREB1 JASPAR yes 49415465
chr16 87886244 87886264 RREB1 JASPAR yes 12247228
chr16 87886244 87886264 RREB1 JASPAR yes 49415466
chr16 87886246 87886266 RREB1 JASPAR yes 12247229
chr16 87886246 87886266 RREB1 JASPAR yes 49415467
chr16 87886248 87886268 RREB1 JASPAR yes 12247230
chr16 87886248 87886268 RREB1 JASPAR yes 49415468
chr16 87886250 87886270 RREB1 JASPAR yes 12247231
chr16 87886250 87886270 RREB1 JASPAR yes 49415469
chr16 87886252 87886272 RREB1 JASPAR yes 12247232
chr16 87886252 87886272 RREB1 JASPAR yes 49415470
chr16 87886254 87886274 RREB1 JASPAR yes 12247233
chr16 87886254 87886274 RREB1 JASPAR yes 49415471
chr16 87886256 87886276 RREB1 JASPAR yes 12247234
chr16 87886256 87886276 RREB1 JASPAR yes 49415472
chr16 87886258 87886278 RREB1 JASPAR yes 12247235
chr16 87886258 87886278 RREB1 JASPAR yes 49415473
chr16 87886260 87886280 RREB1 JASPAR yes 12247236
chr16 87886260 87886280 RREB1 JASPAR yes 49415474
chr16 87886262 87886282 RREB1 JASPAR yes 12247237
chr16 87886262 87886282 RREB1 JASPAR yes 49415475
chr16 87886264 87886284 RREB1 JASPAR yes 12247238
chr16 87886264 87886284 RREB1 JASPAR yes 49415476
chr16 87886266 87886286 RREB1 JASPAR yes 12247239
chr16 87886266 87886286 RREB1 JASPAR yes 49415477
chr16 87886268 87886288 RREB1 JASPAR yes 12247240
chr16 87886268 87886288 RREB1 JASPAR yes 49415478
chr16 87886270 87886290 RREB1 JASPAR yes 12247241
chr16 87886270 87886290 RREB1 JASPAR yes 49415479
chr16 87886272 87886292 RREB1 JASPAR yes 12247242
chr16 87886272 87886292 RREB1 JASPAR yes 49415480
chr16 87886274 87886294 RREB1 JASPAR yes 12247243
chr16 87886274 87886294 RREB1 JASPAR yes 49415481
chr16 87886276 87886296 RREB1 JASPAR yes 12247244
chr16 87886276 87886296 RREB1 JASPAR yes 49415482
chr16 87886278 87886298 RREB1 JASPAR yes 12247245
chr16 87886278 87886298 RREB1 JASPAR yes 49415483
chr16 87886280 87886300 RREB1 JASPAR yes 12247246
chr16 87886280 87886300 RREB1 JASPAR yes 49415484
chr16 87886299 87886312 ATF4 JASPAR yes 12247247
chr16 87886299 87886312 ATF4 JASPAR yes 49415485
chr16 87886300 87886311 CEBPA JASPAR yes 12247248
chr16 87886300 87886311 CEBPA JASPAR yes 49415486
chr16 87886304 87886320 SRF JASPAR yes 12247249
chr16 87886304 87886320 SRF JASPAR yes 49415487
chr16 87886327 87886347 RREB1 JASPAR yes 12247250
chr16 87886327 87886347 RREB1 JASPAR yes 49415488
chr16 87886335 87886355 RREB1 JASPAR yes 12247251
chr16 87886335 87886355 RREB1 JASPAR yes 49415489
chr16 87886337 87886357 RREB1 JASPAR yes 12247252
chr16 87886337 87886357 RREB1 JASPAR yes 49415490
chr16 87886343 87886363 RREB1 JASPAR yes 12247253
chr16 87886343 87886363 RREB1 JASPAR yes 49415491
chr16 87886345 87886365 RREB1 JASPAR yes 12247254
chr16 87886345 87886365 RREB1 JASPAR yes 49415492
chr16 87886347 87886367 RREB1 JASPAR yes 12247255
chr16 87886347 87886367 RREB1 JASPAR yes 49415493
chr16 87886348 87886368 RREB1 JASPAR yes 12247256
chr16 87886348 87886368 RREB1 JASPAR yes 49415494
chr16 87886349 87886369 RREB1 JASPAR yes 12247257
chr16 87886349 87886369 RREB1 JASPAR yes 49415495
chr16 87886350 87886370 RREB1 JASPAR yes 12247258
chr16 87886350 87886370 RREB1 JASPAR yes 49415496
chr16 87886359 87886369 ZNF740 JASPAR yes 12247259
chr16 87886359 87886369 ZNF740 JASPAR yes 49415497
chr16 87886367 87886380 ATF4 JASPAR yes 12247260
chr16 87886367 87886380 ATF4 JASPAR yes 49415498
chr16 87886368 87886379 CEBPA JASPAR yes 12247261
chr16 87886368 87886379 CEBPA JASPAR yes 49415499
chr16 87886381 87886393 HINFP JASPAR yes 12247262
chr16 87886381 87886393 HINFP JASPAR yes 49415500
chr16 87886382 87886393 NRF1 JASPAR yes 12247263
chr16 87886382 87886393 NRF1 JASPAR yes 49415501
chr16 87886390 87886401 FOSL2 JASPAR yes 12247264
chr16 87886390 87886401 FOSL2 JASPAR yes 49415502
chr16 87886395 87886414 REST JASPAR yes 12247265
chr16 87886395 87886414 REST JASPAR yes 49415503
chr16 87886419 87886424 SP1 TRANSFAC yes 12247266
chr16 87886419 87886424 SP1 TRANSFAC yes 49415504
chr16 87886421 87886426 TFAP2A TRANSFAC yes 12247267
chr16 87886421 87886426 TFAP2A TRANSFAC yes 49415505
chr16 87886421 87886427 MZF1 JASPAR yes 12247268
chr16 87886421 87886427 MZF1 JASPAR yes 49415506
chr16 87886432 87886442 ZNF740 JASPAR yes 12247269
chr16 87886432 87886442 ZNF740 JASPAR yes 49415507
chr16 87886458 87886469 PROP1 JASPAR yes 12247270
chr16 87886458 87886469 PROP1 JASPAR yes 49415508
chr16 87886465 87886474 PITX3 JASPAR yes 12247271
chr16 87886465 87886474 PITX3 JASPAR yes 49415509
chr16 87886466 87886474 OTX1 JASPAR yes 12247272
chr16 87886466 87886474 OTX2 JASPAR yes 12247273
chr16 87886466 87886474 RHOXF1 JASPAR yes 12247274
chr16 87886466 87886474 OTX1 JASPAR yes 49415510
chr16 87886466 87886474 OTX2 JASPAR yes 49415511
chr16 87886466 87886474 RHOXF1 JASPAR yes 49415512
chr16 87886514 87886535 ZNF263 JASPAR yes 12247275
chr16 87886514 87886535 ZNF263 JASPAR yes 49415513
chr16 87886534 87886548 GATA2 JASPAR yes 12247276
chr16 87886534 87886548 GATA2 JASPAR yes 49415514
chr16 87886544 87886548 NFE TRANSFAC yes 12247277
chr16 87886544 87886548 NFE TRANSFAC yes 49415515
chr16 87886548 87886563 MAFK JASPAR yes 12247278
chr16 87886548 87886563 MAFK JASPAR yes 49415516
chr16 87886550 87886554 NFE TRANSFAC yes 12247279
chr16 87886550 87886554 NFE TRANSFAC yes 49415517
chr16 87886552 87886563 NRL JASPAR yes 12247280
chr16 87886552 87886563 NRL JASPAR yes 49415518
chr16 87886562 87886574 TGIF1 JASPAR yes 12247281
chr16 87886562 87886574 TGIF2 JASPAR yes 12247282
chr16 87886562 87886574 TGIF1 JASPAR yes 49415519
chr16 87886562 87886574 TGIF2 JASPAR yes 49415520
chr16 87886596 87886611 HNF4G JASPAR yes 12247283
chr16 87886596 87886611 HNF4G JASPAR yes 49415521
chr16 87886597 87886611 NR2F1 JASPAR yes 12247284
chr16 87886597 87886611 NR2F1 JASPAR yes 49415522
chr16 87886597 87886612 HNF4A JASPAR yes 12247285
chr16 87886597 87886612 HNF4A JASPAR yes 49415523
chr16 87886599 87886603 LFA1 TRANSFAC yes 12247286
chr16 87886599 87886603 LFA1 TRANSFAC yes 49415524
chr16 87886610 87886622 HES7 JASPAR yes 12247287
chr16 87886610 87886622 HES7 JASPAR yes 49415525
chr16 87886617 87886631 GLIS3 JASPAR yes 12247288
chr16 87886617 87886631 GLIS3 JASPAR yes 49415526
chr16 87886643 87886656 TFAP2A JASPAR yes 12247289
chr16 87886643 87886656 TFAP2B JASPAR yes 12247290
chr16 87886643 87886656 TFAP2C JASPAR yes 12247291
chr16 87886643 87886656 TFAP2A JASPAR yes 49415527
chr16 87886643 87886656 TFAP2B JASPAR yes 49415528
chr16 87886643 87886656 TFAP2C JASPAR yes 49415529
SNP sites on vista23459[chr16:87886258-87886670]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 87886270 rs560959403 G A
POLR2A RREB1
4655446
chr16 87886314 rs528030032 A G
POLR2A SRF
4655447
chr16 87886340 rs571198334 T C
POLR2A RREB1
4655448
chr16 87886342 rs116092325 T C
POLR2A RREB1
4655449
chr16 87886348 rs550345868 T C
POLR2A RREB1
4655450
chr16 87886376 rs183178438 C T
ATF4 CEBPA POLR2A
4655451
chr16 87886384 rs534178164 G A
HINFP NRF1 POLR2A
4655452
chr16 87886385 rs4843720 C G,T
HINFP NRF1 POLR2A
4655453
chr16 87886436 rs556729861 C T
POLR2A ZNF740
4655454
chr16 87886439 rs191890034 C T
POLR2A ZNF740
4655455
chr16 87886490 rs68149176 C T
POLR2A
4655456
chr16 87886539 rs114782722 G C
GATA2 POLR2A
4655457
chr16 87886540 rs75808773 G A
GATA2 POLR2A
4655458
chr16 87886545 rs66480687 C T
GATA2 NFE POLR2A
4655459
chr16 87886549 rs111446117 C T
MAFK POLR2A
4655460
chr16 87886550 rs117699772 G A
MAFK NFE POLR2A
4655461
chr16 87886626 rs77846542 A G
GLIS3 POLR2A
4655462
chr16 87886629 rs141319556 C A,G
GLIS3 POLR2A
4655463
Genes possibly regulated by vista23459[chr16:87886258-87886670]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 87730091 87799598 - KLHDC4 ENSG00000104731.9 87799598 0.72 1.0 15148 13340
chr16 87863629 87903094 - SLC7A5 ENSG00000103257.4 87903094 0.95 1.0 15150 83576
chr16 87921625 87970135 - CA5A ENSG00000174990.3 87970135 1.0 1.0 15151 16535
chr16 87982850 88110924 + BANP ENSG00000172530.15 87982850 0.68 1.0 15152 3820
Expression level of Genes
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miRNAs possibly regulated by vista23459[chr16:87886258-87886670]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 87868198 87868218 - hsa-miR-6775-3p MIMAT0027451 87903110 0.00030046271257736916 0.0 0.0 638
Expression level of miRNAs
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