EnhancerDB
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  3. rs556729861[chr16:87886436]
Enhancers that have rs556729861[chr16:87886436]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87873744 87902035 enh4182
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
chr16 87886258 87886670 vista23459
VISTA
Transcript factors that have rs556729861[chr16:87886436]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221259
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221260
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221261
chr16 87885277 87886914 ZNF274 GTRD no Liver (HepG2) 21735198
chr16 87885277 87886914 ZNF274 GTRD no Liver (HepG2) 108221264
chr16 87886128 87886484 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21735199
chr16 87886128 87886484 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108221265
chr16 87886153 87886653 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108221266
chr16 87886183 87886439 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108221267
chr16 87886233 87886717 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108221268
chr16 87886432 87886442 ZNF740 JASPAR yes 12247269
chr16 87886432 87886442 ZNF740 JASPAR yes 49415507
Genes associated with rs556729861[chr16:87886436], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More