EnhancerDB
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  3. rs550345868[chr16:87886348]
Enhancers that have rs550345868[chr16:87886348]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87873744 87902035 enh4182
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
chr16 87886258 87886670 vista23459
VISTA
Transcript factors that have rs550345868[chr16:87886348]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221259
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221260
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221261
chr16 87885277 87886914 ZNF274 GTRD no Liver (HepG2) 21735198
chr16 87885277 87886914 ZNF274 GTRD no Liver (HepG2) 108221264
chr16 87886128 87886484 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21735199
chr16 87886128 87886484 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108221265
chr16 87886153 87886653 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108221266
chr16 87886183 87886439 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108221267
chr16 87886233 87886717 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108221268
chr16 87886335 87886355 RREB1 JASPAR yes 12247251
chr16 87886335 87886355 RREB1 JASPAR yes 49415489
chr16 87886337 87886357 RREB1 JASPAR yes 12247252
chr16 87886337 87886357 RREB1 JASPAR yes 49415490
chr16 87886343 87886363 RREB1 JASPAR yes 12247253
chr16 87886343 87886363 RREB1 JASPAR yes 49415491
chr16 87886345 87886365 RREB1 JASPAR yes 12247254
chr16 87886345 87886365 RREB1 JASPAR yes 49415492
chr16 87886347 87886367 RREB1 JASPAR yes 12247255
chr16 87886347 87886367 RREB1 JASPAR yes 49415493
chr16 87886348 87886368 RREB1 JASPAR yes 12247256
chr16 87886348 87886368 RREB1 JASPAR yes 49415494
Genes associated with rs550345868[chr16:87886348], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More