EnhancerDB
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  3. rs560959403[chr16:87886270]
Enhancers that have rs560959403[chr16:87886270]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87873744 87902035 enh4182
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
chr16 87886258 87886670 vista23459
VISTA
Transcript factors that have rs560959403[chr16:87886270]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221259
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221260
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221261
chr16 87884859 87886321 TCF7L2 GTRD no Colon (HCT116) 21735196
chr16 87884859 87886321 TCF7L2 GTRD no Colon (HCT116) 108221262
chr16 87885277 87886914 ZNF274 GTRD no Liver (HepG2) 21735198
chr16 87885277 87886914 ZNF274 GTRD no Liver (HepG2) 108221264
chr16 87886128 87886484 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21735199
chr16 87886128 87886484 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108221265
chr16 87886153 87886653 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108221266
chr16 87886183 87886439 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108221267
chr16 87886233 87886717 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108221268
chr16 87886250 87886270 RREB1 JASPAR yes 12247231
chr16 87886250 87886270 RREB1 JASPAR yes 49415469
chr16 87886252 87886272 RREB1 JASPAR yes 12247232
chr16 87886252 87886272 RREB1 JASPAR yes 49415470
chr16 87886254 87886274 RREB1 JASPAR yes 12247233
chr16 87886254 87886274 RREB1 JASPAR yes 49415471
chr16 87886256 87886276 RREB1 JASPAR yes 12247234
chr16 87886256 87886276 RREB1 JASPAR yes 49415472
chr16 87886258 87886278 RREB1 JASPAR yes 12247235
chr16 87886258 87886278 RREB1 JASPAR yes 49415473
chr16 87886260 87886280 RREB1 JASPAR yes 12247236
chr16 87886260 87886280 RREB1 JASPAR yes 49415474
chr16 87886262 87886282 RREB1 JASPAR yes 12247237
chr16 87886262 87886282 RREB1 JASPAR yes 49415475
chr16 87886264 87886284 RREB1 JASPAR yes 12247238
chr16 87886264 87886284 RREB1 JASPAR yes 49415476
chr16 87886266 87886286 RREB1 JASPAR yes 12247239
chr16 87886266 87886286 RREB1 JASPAR yes 49415477
chr16 87886268 87886288 RREB1 JASPAR yes 12247240
chr16 87886268 87886288 RREB1 JASPAR yes 49415478
chr16 87886270 87886290 RREB1 JASPAR yes 12247241
chr16 87886270 87886290 RREB1 JASPAR yes 49415479
Genes associated with rs560959403[chr16:87886270], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More