EnhancerDB
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  3. vista24752[chr17:38769122-38769524]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24752[chr17:38769122-38769524]
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Tissue distribution of vista24752
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Transcription factor that possibly regulate vista24752[chr17:38769122-38769524]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38769121 38769125 NFE TRANSFAC yes 21236941
chr17 38769121 38769125 NFE TRANSFAC yes 54232072
chr17 38769163 38769174 FOXP2 JASPAR yes 21236942
chr17 38769163 38769174 FOXP2 JASPAR yes 54232073
chr17 38769171 38769179 MGA JASPAR yes 21236943
chr17 38769171 38769179 TBX15 JASPAR yes 21236944
chr17 38769171 38769179 TBX1 JASPAR yes 21236945
chr17 38769171 38769179 TBX4 JASPAR yes 21236946
chr17 38769171 38769179 TBX5 JASPAR yes 21236947
chr17 38769171 38769179 MGA JASPAR yes 54232074
chr17 38769171 38769179 TBX15 JASPAR yes 54232075
chr17 38769171 38769179 TBX1 JASPAR yes 54232076
chr17 38769171 38769179 TBX4 JASPAR yes 54232077
chr17 38769171 38769179 TBX5 JASPAR yes 54232078
chr17 38769183 38769186 MYB TRANSFAC yes 21236948
chr17 38769183 38769186 MYB TRANSFAC yes 54232079
chr17 38769194 38769204 ELK1 JASPAR yes 21236949
chr17 38769194 38769204 ELK1 JASPAR yes 54232080
chr17 38769196 38769207 ELK4 JASPAR yes 21236950
chr17 38769196 38769207 ELK4 JASPAR yes 54232081
chr17 38769198 38769204 ETS1 JASPAR yes 21236951
chr17 38769198 38769204 ETS1 JASPAR yes 54232082
chr17 38769207 38769223 RFX4 JASPAR yes 21236952
chr17 38769207 38769223 RFX4 JASPAR yes 54232083
chr17 38769220 38769232 CREB1 JASPAR yes 21236953
chr17 38769220 38769232 CREB1 JASPAR yes 54232084
chr17 38769227 38769236 ZEB1 JASPAR yes 21236954
chr17 38769227 38769236 ZEB1 JASPAR yes 54232085
chr17 38769227 38769239 NHLH1 JASPAR yes 21236955
chr17 38769227 38769239 NHLH1 JASPAR yes 54232086
chr17 38769228 38769238 NHLH1 JASPAR yes 21236956
chr17 38769228 38769238 NHLH1 JASPAR yes 54232087
chr17 38769230 38769235 USF2 TRANSFAC yes 21236957
chr17 38769230 38769235 USF2 TRANSFAC yes 54232088
chr17 38769237 38769243 PEA3 TRANSFAC yes 21236958
chr17 38769237 38769243 PEA3 TRANSFAC yes 54232089
chr17 38769257 38769266 NKX2-8 JASPAR yes 21236959
chr17 38769257 38769266 NKX2-8 JASPAR yes 54232090
chr17 38769257 38769271 TCF7L2 JASPAR yes 21236960
chr17 38769257 38769271 TCF7L2 JASPAR yes 54232091
chr17 38769261 38769267 TCF1 TRANSFAC yes 21236961
chr17 38769261 38769267 TCF1 TRANSFAC yes 54232092
chr17 38769276 38769290 TLX1 JASPAR yes 21236962
chr17 38769276 38769290 TLX1 JASPAR yes 54232093
chr17 38769276 38769291 ESR2 JASPAR yes 21236963
chr17 38769276 38769291 ESR2 JASPAR yes 54232094
chr17 38769276 38769296 ESR1 JASPAR yes 21236964
chr17 38769276 38769296 ESR1 JASPAR yes 54232095
chr17 38769285 38769296 TFAP2A JASPAR yes 21236965
chr17 38769285 38769296 TFAP2B JASPAR yes 21236966
chr17 38769285 38769296 TFAP2C JASPAR yes 21236967
chr17 38769285 38769296 TFAP2A JASPAR yes 54232096
chr17 38769285 38769296 TFAP2B JASPAR yes 54232097
chr17 38769285 38769296 TFAP2C JASPAR yes 54232098
chr17 38769285 38769297 TFAP2B JASPAR yes 21236968
chr17 38769285 38769297 TFAP2C JASPAR yes 21236969
chr17 38769285 38769297 TFAP2B JASPAR yes 54232099
chr17 38769285 38769297 TFAP2C JASPAR yes 54232100
chr17 38769286 38769295 TFAP2A JASPAR yes 21236970
chr17 38769286 38769295 TFAP2A JASPAR yes 54232101
chr17 38769297 38769314 RXRA JASPAR yes 21236971
chr17 38769297 38769314 RXRA JASPAR yes 54232102
chr17 38769303 38769307 NFE TRANSFAC yes 21236972
chr17 38769303 38769307 NFE TRANSFAC yes 54232103
chr17 38769312 38769316 YY1 TRANSFAC yes 21236973
chr17 38769312 38769316 YY1 TRANSFAC yes 54232104
chr17 38769332 38769338 TCF4 TRANSFAC yes 21236974
chr17 38769332 38769338 TCF4 TRANSFAC yes 54232105
chr17 38769346 38769350 YY1 TRANSFAC yes 21236975
chr17 38769346 38769350 YY1 TRANSFAC yes 54232106
chr17 38769350 38769361 PHOX2A JASPAR yes 21236976
chr17 38769350 38769361 PROP1 JASPAR yes 21236977
chr17 38769350 38769361 PHOX2A JASPAR yes 54232107
chr17 38769350 38769361 PROP1 JASPAR yes 54232108
chr17 38769358 38769368 ALX3 JASPAR yes 21236978
chr17 38769358 38769368 GSX2 JASPAR yes 21236979
chr17 38769358 38769368 MIXL1 JASPAR yes 21236980
chr17 38769358 38769368 MNX1 JASPAR yes 21236981
chr17 38769358 38769368 ALX3 JASPAR yes 54232109
chr17 38769358 38769368 GSX2 JASPAR yes 54232110
chr17 38769358 38769368 MIXL1 JASPAR yes 54232111
chr17 38769358 38769368 MNX1 JASPAR yes 54232112
chr17 38769359 38769367 ISX JASPAR yes 21236982
chr17 38769359 38769367 LMX1A JASPAR yes 21236983
chr17 38769359 38769367 LMX1B JASPAR yes 21236984
chr17 38769359 38769367 NKX6-1 JASPAR yes 21236985
chr17 38769359 38769367 NKX6-2 JASPAR yes 21236986
chr17 38769359 38769367 PRRX1 JASPAR yes 21236987
chr17 38769359 38769367 RAX2 JASPAR yes 21236988
chr17 38769359 38769367 SHOX JASPAR yes 21236989
chr17 38769359 38769367 UNCX JASPAR yes 21236990
chr17 38769359 38769367 VAX1 JASPAR yes 21236991
chr17 38769359 38769367 ISX JASPAR yes 54232113
chr17 38769359 38769367 LMX1A JASPAR yes 54232114
chr17 38769359 38769367 LMX1B JASPAR yes 54232115
chr17 38769359 38769367 NKX6-1 JASPAR yes 54232116
chr17 38769359 38769367 NKX6-2 JASPAR yes 54232117
chr17 38769359 38769367 PRRX1 JASPAR yes 54232118
chr17 38769359 38769367 RAX2 JASPAR yes 54232119
chr17 38769359 38769367 SHOX JASPAR yes 54232120
chr17 38769359 38769367 UNCX JASPAR yes 54232121
chr17 38769359 38769367 VAX1 JASPAR yes 54232122
chr17 38769373 38769378 SP1 TRANSFAC yes 21236992
chr17 38769373 38769378 SP1 TRANSFAC yes 54232123
chr17 38769373 38769391 ESR1 JASPAR yes 21236993
chr17 38769373 38769391 ESR1 JASPAR yes 54232124
chr17 38769403 38769407 NFE TRANSFAC yes 21236994
chr17 38769403 38769407 NFE TRANSFAC yes 54232125
chr17 38769408 38769418 ETV5 JASPAR yes 21236995
chr17 38769408 38769418 ETV5 JASPAR yes 54232126
chr17 38769431 38769444 ELF1 JASPAR yes 21236996
chr17 38769431 38769444 ELF1 JASPAR yes 54232127
chr17 38769432 38769444 EHF JASPAR yes 21236997
chr17 38769432 38769444 ELF1 JASPAR yes 21236998
chr17 38769432 38769444 ELF4 JASPAR yes 21236999
chr17 38769432 38769444 EHF JASPAR yes 54232128
chr17 38769432 38769444 ELF1 JASPAR yes 54232129
chr17 38769432 38769444 ELF4 JASPAR yes 54232130
chr17 38769432 38769445 ELF3 JASPAR yes 21237000
chr17 38769432 38769445 ELF3 JASPAR yes 54232131
chr17 38769432 38769453 IRF1 JASPAR yes 21237001
chr17 38769432 38769453 IRF1 JASPAR yes 54232132
chr17 38769433 38769444 ELF5 JASPAR yes 21237002
chr17 38769433 38769444 ELF5 JASPAR yes 54232133
chr17 38769434 38769441 ETS1 TRANSFAC yes 21237003
chr17 38769434 38769441 ETS1 TRANSFAC yes 54232134
chr17 38769434 38769445 FLI1 JASPAR yes 21237004
chr17 38769434 38769445 FLI1 JASPAR yes 54232135
chr17 38769436 38769451 STAT2 JASPAR yes 21237005
chr17 38769436 38769451 STAT2 JASPAR yes 54232136
chr17 38769437 38769449 IRF1 JASPAR yes 21237006
chr17 38769437 38769449 IRF1 JASPAR yes 54232137
chr17 38769478 38769487 THAP1 JASPAR yes 21237007
chr17 38769478 38769487 THAP1 JASPAR yes 54232138
chr17 38769480 38769486 YY1 JASPAR yes 21237008
chr17 38769480 38769486 YY1 JASPAR yes 54232139
chr17 38769481 38769502 ZNF263 JASPAR yes 21237009
chr17 38769481 38769502 ZNF263 JASPAR yes 54232140
chr17 38769483 38769493 SREBF1 JASPAR yes 21237010
chr17 38769483 38769493 SREBF2 JASPAR yes 21237011
chr17 38769483 38769493 SREBF1 JASPAR yes 54232141
chr17 38769483 38769493 SREBF2 JASPAR yes 54232142
chr17 38769490 38769494 YY1 TRANSFAC yes 21237012
chr17 38769490 38769494 YY1 TRANSFAC yes 54232143
chr17 38769494 38769515 IRF1 JASPAR yes 21237013
chr17 38769494 38769515 IRF1 JASPAR yes 54232144
chr17 38769520 38769531 BATF JASPAR yes 21237014
chr17 38769520 38769531 BATF JASPAR yes 54232145
SNP sites on vista24752[chr17:38769122-38769524]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38769163 rs567054894 C CA
FOXP2
4868844
chr17 38769181 rs529604040 C T no 4868845
chr17 38769377 rs190702856 G C
ESR1 SP1
4868846
chr17 38769442 rs561527904 GC G
EHF ELF1 ELF3 ELF4 ELF5 FLI1 IRF1 STAT2
4868847
chr17 38769508 rs568776830 T G
IRF1
4868848
chr17 38769509 rs538732657 A AGT
IRF1
4868849
Genes possibly regulated by vista24752[chr17:38769122-38769524]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38710021 38721724 - CCR7 ENSG00000126353.3 38721724 0.98 0.94 15770 52602
chr17 38781214 38804760 - SMARCE1 ENSG00000073584.14 38804760 0.77 0.97 15771 64764
chr17 38785049 38821393 - KRT222 ENSG00000264058.1 38821393 0.92 1.0 15772 48131
chr17 38810917 38821433 - KRT222 ENSG00000213424.4 38821433 0.82 0.98 15773 48091
chr17 38854243 38860002 - KRT24 ENSG00000167916.4 38860002 0.99 0.98 15774 9522
Expression level of Genes
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miRNAs possibly regulated by vista24752[chr17:38769122-38769524]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results