EnhancerDB
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Enhancers that have rs190702856[chr17:38769377]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38750565 38781175 enh17142
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1)
chr17 38769122 38769524 vista24752
VISTA
Transcript factors that have rs190702856[chr17:38769377]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38763657 38771002 ZBTB33 GTRD no Lung (A549) 108257638
chr17 38763657 38771002 ZBTB33 GTRD no Lung (A549) 108257639
chr17 38763657 38771002 ZBTB33 GTRD no Lung (A549) 108257640
chr17 38763657 38771002 ZBTB33 GTRD no Lung (A549) 108257641
chr17 38765393 38769819 ZBTB33 GTRD no Lung (A549) 108257651
chr17 38767229 38769908 ZBTB33 GTRD no Lung (A549) 108257652
chr17 38769059 38769435 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108257655
chr17 38769373 38769378 SP1 TRANSFAC yes 21236992
chr17 38769373 38769378 SP1 TRANSFAC yes 54232123
chr17 38769373 38769391 ESR1 JASPAR yes 21236993
chr17 38769373 38769391 ESR1 JASPAR yes 54232124
Genes associated with rs190702856[chr17:38769377], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More