EnhancerDB
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Enhancers that have rs567054894[chr17:38769163]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38750565 38781175 enh17142
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1)
chr17 38769122 38769524 vista24752
VISTA
Transcript factors that have rs567054894[chr17:38769163]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38763657 38771002 ZBTB33 GTRD no Lung (A549) 108257638
chr17 38763657 38771002 ZBTB33 GTRD no Lung (A549) 108257639
chr17 38763657 38771002 ZBTB33 GTRD no Lung (A549) 108257640
chr17 38763657 38771002 ZBTB33 GTRD no Lung (A549) 108257641
chr17 38765393 38769819 ZBTB33 GTRD no Lung (A549) 108257651
chr17 38767229 38769908 ZBTB33 GTRD no Lung (A549) 108257652
chr17 38767321 38769208 ZBTB33 GTRD no Lung (A549) 108257653
chr17 38769059 38769435 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108257655
chr17 38769163 38769174 FOXP2 JASPAR yes 21236942
chr17 38769163 38769174 FOXP2 JASPAR yes 54232073
Genes associated with rs567054894[chr17:38769163], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More