EnhancerDB
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  3. rs561527904[chr17:38769442]
Enhancers that have rs561527904[chr17:38769442]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38750565 38781175 enh17142
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1)
chr17 38769122 38769524 vista24752
VISTA
Transcript factors that have rs561527904[chr17:38769442]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38763657 38771002 ZBTB33 GTRD no Lung (A549) 108257638
chr17 38763657 38771002 ZBTB33 GTRD no Lung (A549) 108257639
chr17 38763657 38771002 ZBTB33 GTRD no Lung (A549) 108257640
chr17 38763657 38771002 ZBTB33 GTRD no Lung (A549) 108257641
chr17 38765393 38769819 ZBTB33 GTRD no Lung (A549) 108257651
chr17 38767229 38769908 ZBTB33 GTRD no Lung (A549) 108257652
chr17 38769431 38769444 ELF1 JASPAR yes 21236996
chr17 38769431 38769444 ELF1 JASPAR yes 54232127
chr17 38769432 38769444 EHF JASPAR yes 21236997
chr17 38769432 38769444 ELF1 JASPAR yes 21236998
chr17 38769432 38769444 ELF4 JASPAR yes 21236999
chr17 38769432 38769444 EHF JASPAR yes 54232128
chr17 38769432 38769444 ELF1 JASPAR yes 54232129
chr17 38769432 38769444 ELF4 JASPAR yes 54232130
chr17 38769432 38769445 ELF3 JASPAR yes 21237000
chr17 38769432 38769445 ELF3 JASPAR yes 54232131
chr17 38769432 38769453 IRF1 JASPAR yes 21237001
chr17 38769432 38769453 IRF1 JASPAR yes 54232132
chr17 38769433 38769444 ELF5 JASPAR yes 21237002
chr17 38769433 38769444 ELF5 JASPAR yes 54232133
chr17 38769434 38769445 FLI1 JASPAR yes 21237004
chr17 38769434 38769445 FLI1 JASPAR yes 54232135
chr17 38769436 38769451 STAT2 JASPAR yes 21237005
chr17 38769436 38769451 STAT2 JASPAR yes 54232136
chr17 38769437 38769449 IRF1 JASPAR yes 21237006
chr17 38769437 38769449 IRF1 JASPAR yes 54232137
Genes associated with rs561527904[chr17:38769442], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More