EnhancerDB
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  3. vista25105[chr17:48288364-48288588]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25105[chr17:48288364-48288588]
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Tissue distribution of vista25105
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Transcription factor that possibly regulate vista25105[chr17:48288364-48288588]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 48286842 48288527 POLR2A UCSC Txn Factor no Conserved 108270622
chr17 48286842 48288527 POLR2A UCSC Txn Factor no Conserved 108270623
chr17 48288352 48288366 CREB3 JASPAR yes 21254063
chr17 48288352 48288366 CREB3L1 JASPAR yes 21254064
chr17 48288352 48288366 CREB3 JASPAR yes 54687277
chr17 48288352 48288366 CREB3L1 JASPAR yes 54687278
chr17 48288354 48288364 HEY2 JASPAR yes 21254065
chr17 48288354 48288364 HEY2 JASPAR yes 54687279
chr17 48288369 48288374 SP1 TRANSFAC yes 21254066
chr17 48288369 48288374 SP1 TRANSFAC yes 54687280
chr17 48288371 48288376 TFAP2A TRANSFAC yes 21254067
chr17 48288371 48288376 TFAP2A TRANSFAC yes 54687281
chr17 48288371 48288377 MZF1 JASPAR yes 21254068
chr17 48288371 48288377 MZF1 JASPAR yes 54687282
chr17 48288379 48288389 HINFP JASPAR yes 21254069
chr17 48288379 48288389 HINFP JASPAR yes 54687283
chr17 48288379 48288391 HINFP JASPAR yes 21254070
chr17 48288379 48288391 HINFP JASPAR yes 54687284
chr17 48288401 48288411 MAX JASPAR yes 21254071
chr17 48288401 48288411 MAX JASPAR yes 54687285
chr17 48288401 48288412 USF1 JASPAR yes 21254072
chr17 48288401 48288412 USF2 JASPAR yes 21254073
chr17 48288401 48288412 USF1 JASPAR yes 54687286
chr17 48288401 48288412 USF2 JASPAR yes 54687287
chr17 48288401 48288413 HES5 JASPAR yes 21254074
chr17 48288401 48288413 HES7 JASPAR yes 21254075
chr17 48288401 48288413 HES5 JASPAR yes 54687288
chr17 48288401 48288413 HES7 JASPAR yes 54687289
chr17 48288402 48288412 CLOCK JASPAR yes 21254076
chr17 48288402 48288412 HEY1 JASPAR yes 21254077
chr17 48288402 48288412 HEY2 JASPAR yes 21254078
chr17 48288402 48288412 MAX JASPAR yes 21254079
chr17 48288402 48288412 MNT JASPAR yes 21254080
chr17 48288402 48288412 TFEB JASPAR yes 21254081
chr17 48288402 48288412 CLOCK JASPAR yes 54687290
chr17 48288402 48288412 HEY1 JASPAR yes 54687291
chr17 48288402 48288412 HEY2 JASPAR yes 54687292
chr17 48288402 48288412 MAX JASPAR yes 54687293
chr17 48288402 48288412 MNT JASPAR yes 54687294
chr17 48288402 48288412 TFEB JASPAR yes 54687295
chr17 48288402 48288413 USF1 JASPAR yes 21254082
chr17 48288402 48288413 USF1 JASPAR yes 54687296
chr17 48288403 48288410 USF1 JASPAR yes 21254083
chr17 48288403 48288410 USF1 JASPAR yes 54687297
chr17 48288403 48288413 MAX JASPAR yes 21254084
chr17 48288403 48288413 MAX JASPAR yes 54687298
chr17 48288404 48288409 MYC TRANSFAC yes 21254085
chr17 48288404 48288409 USF1 TRANSFAC yes 21254086
chr17 48288404 48288409 USF2 TRANSFAC yes 21254087
chr17 48288404 48288409 MYC TRANSFAC yes 54687299
chr17 48288404 48288409 USF1 TRANSFAC yes 54687300
chr17 48288404 48288409 USF2 TRANSFAC yes 54687301
chr17 48288408 48288423 HSF1 JASPAR yes 21254088
chr17 48288408 48288423 HSF1 JASPAR yes 54687302
chr17 48288409 48288422 HSF4 JASPAR yes 21254089
chr17 48288409 48288422 HSF4 JASPAR yes 54687303
chr17 48288418 48288427 THAP1 JASPAR yes 21254090
chr17 48288418 48288427 THAP1 JASPAR yes 54687304
chr17 48288444 48288458 TLX1 JASPAR yes 21254091
chr17 48288444 48288458 TLX1 JASPAR yes 54687305
chr17 48288448 48288461 SMAD2 JASPAR yes 21254092
chr17 48288448 48288461 SMAD2 JASPAR yes 54687306
chr17 48288452 48288473 ZNF263 JASPAR yes 21254093
chr17 48288452 48288473 ZNF263 JASPAR yes 54687307
chr17 48288455 48288476 ZNF263 JASPAR yes 21254094
chr17 48288455 48288476 ZNF263 JASPAR yes 54687308
chr17 48288456 48288466 ZNF740 JASPAR yes 21254095
chr17 48288456 48288466 ZNF740 JASPAR yes 54687309
chr17 48288457 48288478 ZNF263 JASPAR yes 21254096
chr17 48288457 48288478 ZNF263 JASPAR yes 54687310
chr17 48288458 48288479 ZNF263 JASPAR yes 21254097
chr17 48288458 48288479 ZNF263 JASPAR yes 54687311
chr17 48288460 48288466 SP1 TRANSFAC yes 21254098
chr17 48288460 48288466 SP1 TRANSFAC yes 54687312
chr17 48288460 48288470 SP1 JASPAR yes 21254099
chr17 48288460 48288470 SP1 JASPAR yes 54687313
chr17 48288461 48288482 ZNF263 JASPAR yes 21254100
chr17 48288461 48288482 ZNF263 JASPAR yes 54687314
chr17 48288464 48288485 ZNF263 JASPAR yes 21254101
chr17 48288464 48288485 ZNF263 JASPAR yes 54687315
chr17 48288466 48288487 ZNF263 JASPAR yes 21254102
chr17 48288466 48288487 ZNF263 JASPAR yes 54687316
chr17 48288469 48288480 E2F6 JASPAR yes 21254103
chr17 48288469 48288480 E2F6 JASPAR yes 54687317
chr17 48288481 48288487 MZF1 JASPAR yes 21254104
chr17 48288481 48288487 MZF1 JASPAR yes 54687318
chr17 48288498 48288504 NFE2 TRANSFAC yes 21254105
chr17 48288498 48288504 NFE2 TRANSFAC yes 54687319
chr17 48288502 48288508 SP1 TRANSFAC yes 21254106
chr17 48288502 48288508 SP1 TRANSFAC yes 54687320
chr17 48288502 48288512 SP1 JASPAR yes 21254107
chr17 48288502 48288512 SP1 JASPAR yes 54687321
chr17 48288505 48288520 LEF1 JASPAR yes 21254108
chr17 48288505 48288520 LEF1 JASPAR yes 54687322
chr17 48288506 48288520 TCF7L2 JASPAR yes 21254109
chr17 48288506 48288520 TCF7L2 JASPAR yes 54687323
chr17 48288524 48288538 GLIS3 JASPAR yes 21254110
chr17 48288524 48288538 GLIS3 JASPAR yes 54687324
chr17 48288527 48288547 RREB1 JASPAR yes 21254111
chr17 48288527 48288547 RREB1 JASPAR yes 54687325
chr17 48288528 48288540 ZBTB7B JASPAR yes 21254112
chr17 48288528 48288540 ZBTB7B JASPAR yes 54687326
chr17 48288538 48288547 SP1 TRANSFAC yes 21254113
chr17 48288538 48288547 SP1 TRANSFAC yes 54687327
chr17 48288538 48288548 SP1 JASPAR yes 21254114
chr17 48288538 48288548 SP1 JASPAR yes 54687328
chr17 48288538 48288559 ZNF263 JASPAR yes 21254115
chr17 48288538 48288559 ZNF263 JASPAR yes 54687329
chr17 48288539 48288548 SP1 TRANSFAC yes 21254116
chr17 48288539 48288548 SP1 TRANSFAC yes 54687330
chr17 48288540 48288546 MAZ TRANSFAC yes 21254117
chr17 48288540 48288546 MAZ TRANSFAC yes 54687331
chr17 48288556 48288561 ETS2 TRANSFAC yes 21254118
chr17 48288556 48288561 ETS2 TRANSFAC yes 54687332
chr17 48288568 48288586 NR3C1 JASPAR yes 21254119
chr17 48288568 48288586 NR3C1 JASPAR yes 54687333
chr17 48288585 48288595 ZNF740 JASPAR yes 21254120
chr17 48288585 48288595 ZNF740 JASPAR yes 54687334
SNP sites on vista25105[chr17:48288364-48288588]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 48288396 rs2246839 G A
POLR2A
4921627
chr17 48288404 rs145611811 C A,T
CLOCK HES5 HES7 HEY1 HEY2 MAX MNT MYC POLR2A TFEB USF1 USF2
4921628
chr17 48288459 rs118083201 C T
POLR2A SMAD2 ZNF263 ZNF740
4921629
chr17 48288462 rs78516251 C A,G
POLR2A SP1 ZNF263 ZNF740
4921630
chr17 48288474 rs536170360 C T
E2F6 POLR2A ZNF263
4921631
chr17 48288559 rs548238108 G C
ETS2 ZNF263
4921632
Genes possibly regulated by vista25105[chr17:48288364-48288588]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 48187404 48207246 - SAMD14 ENSG00000167100.10 48207246 0.88 1.0 16026 18882
chr17 48211104 48227991 - PPP1R9B ENSG00000108819.9 48227991 0.74 1.0 16027 39627
chr17 48241575 48253292 + SGCA ENSG00000108823.11 48241575 0.88 1.0 16028 53211
chr17 48260650 48278993 - COL1A1 ENSG00000108821.9 48278993 0.95 0.99 16029 90629
chr17 48348767 48358844 + TMEM92 ENSG00000167105.3 48348767 0.95 1.0 16030 39821
Expression level of Genes
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miRNAs possibly regulated by vista25105[chr17:48288364-48288588]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results