EnhancerDB
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  3. rs548238108[chr17:48288559]
Enhancers that have rs548238108[chr17:48288559]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48279381 48302635 enh17216
Bone Marrow (K562) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Uterus Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 48288364 48288588 vista25105
VISTA
Transcript factors that have rs548238108[chr17:48288559]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48288285 48288838 TCF7L2 GTRD no Colon (HCT116) 108270659
chr17 48288340 48288761 ZNF143 GTRD no Epithelial (MCF-7) 108270660
chr17 48288389 48288820 ZNF143 GTRD no Epithelial (MCF-7) 108270661
chr17 48288538 48288559 ZNF263 JASPAR yes 21254115
chr17 48288538 48288559 ZNF263 JASPAR yes 54687329
chr17 48288556 48288561 ETS2 TRANSFAC yes 21254118
chr17 48288556 48288561 ETS2 TRANSFAC yes 54687332
Genes associated with rs548238108[chr17:48288559], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More