EnhancerDB
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  3. rs2246839[chr17:48288396]
Enhancers that have rs2246839[chr17:48288396]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48279381 48302635 enh17216
Bone Marrow (K562) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Uterus Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 48288364 48288588 vista25105
VISTA
Transcript factors that have rs2246839[chr17:48288396]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48286842 48288527 POLR2A UCSC Txn Factor no Conserved 108270622
chr17 48286842 48288527 POLR2A UCSC Txn Factor no Conserved 108270623
chr17 48288202 48288512 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21769633
chr17 48288202 48288512 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108270658
chr17 48288285 48288838 TCF7L2 GTRD no Colon (HCT116) 108270659
chr17 48288340 48288761 ZNF143 GTRD no Epithelial (MCF-7) 108270660
chr17 48288389 48288820 ZNF143 GTRD no Epithelial (MCF-7) 108270661
Genes associated with rs2246839[chr17:48288396], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More