EnhancerDB
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  3. rs78516251[chr17:48288462]
Enhancers that have rs78516251[chr17:48288462]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48279381 48302635 enh17216
Bone Marrow (K562) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Uterus Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 48288364 48288588 vista25105
VISTA
Transcript factors that have rs78516251[chr17:48288462]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48286842 48288527 POLR2A UCSC Txn Factor no Conserved 108270622
chr17 48286842 48288527 POLR2A UCSC Txn Factor no Conserved 108270623
chr17 48288202 48288512 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21769633
chr17 48288202 48288512 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108270658
chr17 48288285 48288838 TCF7L2 GTRD no Colon (HCT116) 108270659
chr17 48288340 48288761 ZNF143 GTRD no Epithelial (MCF-7) 108270660
chr17 48288389 48288820 ZNF143 GTRD no Epithelial (MCF-7) 108270661
chr17 48288452 48288473 ZNF263 JASPAR yes 21254093
chr17 48288452 48288473 ZNF263 JASPAR yes 54687307
chr17 48288455 48288476 ZNF263 JASPAR yes 21254094
chr17 48288455 48288476 ZNF263 JASPAR yes 54687308
chr17 48288456 48288466 ZNF740 JASPAR yes 21254095
chr17 48288456 48288466 ZNF740 JASPAR yes 54687309
chr17 48288457 48288478 ZNF263 JASPAR yes 21254096
chr17 48288457 48288478 ZNF263 JASPAR yes 54687310
chr17 48288458 48288479 ZNF263 JASPAR yes 21254097
chr17 48288458 48288479 ZNF263 JASPAR yes 54687311
chr17 48288460 48288466 SP1 TRANSFAC yes 21254098
chr17 48288460 48288466 SP1 TRANSFAC yes 54687312
chr17 48288460 48288470 SP1 JASPAR yes 21254099
chr17 48288460 48288470 SP1 JASPAR yes 54687313
chr17 48288461 48288482 ZNF263 JASPAR yes 21254100
chr17 48288461 48288482 ZNF263 JASPAR yes 54687314
Genes associated with rs78516251[chr17:48288462], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More