EnhancerDB
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  3. vista25238[chr17:55628691-55629280]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25238[chr17:55628691-55629280]
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Tissue distribution of vista25238
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Transcription factor that possibly regulate vista25238[chr17:55628691-55629280]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 55628817 55629133 EBF1 UCSC Txn Factor no Conserved 108274164
chr17 55628834 55629178 RUNX3 UCSC Txn Factor no Conserved 108274168
chr17 55628912 55629222 POU2F2 UCSC Txn Factor no Conserved 108274181
chr17 55628687 55628696 ZEB1 JASPAR yes 21259873
chr17 55628687 55628696 ZEB1 JASPAR yes 54968324
chr17 55628690 55628695 USF2 TRANSFAC yes 21259874
chr17 55628690 55628695 USF2 TRANSFAC yes 54968325
chr17 55628690 55628699 SP1 TRANSFAC yes 21259875
chr17 55628690 55628699 SP1 TRANSFAC yes 54968326
chr17 55628697 55628702 SP1 TRANSFAC yes 21259876
chr17 55628697 55628702 SP1 TRANSFAC yes 54968327
chr17 55628699 55628704 TFAP2A TRANSFAC yes 21259877
chr17 55628699 55628704 TFAP2A TRANSFAC yes 54968328
chr17 55628707 55628722 RFX5 JASPAR yes 21259878
chr17 55628707 55628722 RFX5 JASPAR yes 54968329
chr17 55628711 55628726 RUNX2 JASPAR yes 21259879
chr17 55628711 55628726 RUNX2 JASPAR yes 54968330
chr17 55628721 55628725 H4TF2 TRANSFAC yes 21259880
chr17 55628721 55628725 H4TF2 TRANSFAC yes 54968331
chr17 55628731 55628739 MGA JASPAR yes 21259881
chr17 55628731 55628739 MGA JASPAR yes 54968332
chr17 55628736 55628740 NFE TRANSFAC yes 21259882
chr17 55628736 55628740 NFE TRANSFAC yes 54968333
chr17 55628738 55628749 TFAP2A JASPAR yes 21259883
chr17 55628738 55628749 TFAP2B JASPAR yes 21259884
chr17 55628738 55628749 TFAP2A JASPAR yes 54968334
chr17 55628738 55628749 TFAP2B JASPAR yes 54968335
chr17 55628739 55628748 TFAP2A JASPAR yes 21259885
chr17 55628739 55628748 TFAP2A JASPAR yes 54968336
chr17 55628753 55628764 TFAP2A JASPAR yes 21259886
chr17 55628753 55628764 TFAP2B JASPAR yes 21259887
chr17 55628753 55628764 TFAP2A JASPAR yes 54968337
chr17 55628753 55628764 TFAP2B JASPAR yes 54968338
chr17 55628758 55628766 SP1 TRANSFAC yes 21259888
chr17 55628758 55628766 SP1 TRANSFAC yes 54968339
chr17 55628760 55628766 MAZ TRANSFAC yes 21259889
chr17 55628760 55628766 MAZ TRANSFAC yes 54968340
chr17 55628761 55628776 NR2C2 JASPAR yes 21259890
chr17 55628761 55628776 NR2C2 JASPAR yes 54968341
chr17 55628763 55628769 SP1 TRANSFAC yes 21259891
chr17 55628763 55628769 SP1 TRANSFAC yes 54968342
chr17 55628764 55628769 SP1 TRANSFAC yes 21259892
chr17 55628764 55628769 SP1 TRANSFAC yes 54968343
chr17 55628791 55628812 ZNF263 JASPAR yes 21259893
chr17 55628791 55628812 ZNF263 JASPAR yes 54968344
chr17 55628795 55628804 ZEB1 JASPAR yes 21259894
chr17 55628795 55628804 ZEB1 JASPAR yes 54968345
chr17 55628796 55628800 H1TF2 TRANSFAC yes 21259895
chr17 55628796 55628800 NFE TRANSFAC yes 21259896
chr17 55628796 55628800 SRF TRANSFAC yes 21259897
chr17 55628796 55628800 H1TF2 TRANSFAC yes 54968346
chr17 55628796 55628800 NFE TRANSFAC yes 54968347
chr17 55628796 55628800 SRF TRANSFAC yes 54968348
chr17 55628797 55628802 SP1 TRANSFAC yes 21259898
chr17 55628797 55628802 SP1 TRANSFAC yes 54968349
chr17 55628817 55628823 TCF4 TRANSFAC yes 21259899
chr17 55628817 55628823 TCF4 TRANSFAC yes 54968350
chr17 55628847 55628852 NFY TRANSFAC yes 21259900
chr17 55628847 55628852 NFY TRANSFAC yes 54968351
chr17 55628848 55628858 NFATC3 JASPAR yes 21259901
chr17 55628848 55628858 NFATC3 JASPAR yes 54968352
chr17 55628859 55628878 PAX5 JASPAR yes 21259902
chr17 55628859 55628878 PAX5 JASPAR yes 54968353
chr17 55628879 55628888 SNAI2 JASPAR yes 21259903
chr17 55628879 55628888 SNAI2 JASPAR yes 54968354
chr17 55628884 55628897 ZBTB18 JASPAR yes 21259904
chr17 55628884 55628897 ZBTB18 JASPAR yes 54968355
chr17 55628895 55628915 TP63 JASPAR yes 21259905
chr17 55628895 55628915 TP63 JASPAR yes 54968356
chr17 55628899 55628904 MYC TRANSFAC yes 21259906
chr17 55628899 55628904 MYC TRANSFAC yes 54968357
chr17 55628905 55628917 CREB1 JASPAR yes 21259907
chr17 55628905 55628917 CREB1 JASPAR yes 54968358
chr17 55628907 55628913 TBP TRANSFAC yes 21259908
chr17 55628907 55628913 TBP TRANSFAC yes 54968359
chr17 55628907 55628921 BATF3 JASPAR yes 21259909
chr17 55628907 55628921 BATF3 JASPAR yes 54968360
chr17 55628908 55628920 PROX1 JASPAR yes 21259910
chr17 55628908 55628920 PROX1 JASPAR yes 54968361
chr17 55628910 55628915 ATF1 TRANSFAC yes 21259911
chr17 55628910 55628915 ATF1 TRANSFAC yes 54968362
chr17 55628910 55628918 CREB1 JASPAR yes 21259912
chr17 55628910 55628918 CREB1 JASPAR yes 54968363
chr17 55628925 55628935 ID4 JASPAR yes 21259913
chr17 55628925 55628935 TCF3 JASPAR yes 21259914
chr17 55628925 55628935 TCF4 JASPAR yes 21259915
chr17 55628925 55628935 ID4 JASPAR yes 54968364
chr17 55628925 55628935 TCF3 JASPAR yes 54968365
chr17 55628925 55628935 TCF4 JASPAR yes 54968366
chr17 55628942 55628946 ESR1 TRANSFAC yes 21259916
chr17 55628942 55628946 ESR1 TRANSFAC yes 54968367
chr17 55628966 55628987 ZNF263 JASPAR yes 21259917
chr17 55628966 55628987 ZNF263 JASPAR yes 54968368
chr17 55628971 55628976 SP1 TRANSFAC yes 21259918
chr17 55628971 55628976 SP1 TRANSFAC yes 54968369
chr17 55628972 55628993 ZNF263 JASPAR yes 21259919
chr17 55628972 55628993 ZNF263 JASPAR yes 54968370
chr17 55628973 55628983 ZNF740 JASPAR yes 21259920
chr17 55628973 55628983 ZNF740 JASPAR yes 54968371
chr17 55628977 55628987 SP1 JASPAR yes 21259921
chr17 55628977 55628987 SP1 JASPAR yes 54968372
chr17 55628979 55628990 ELK4 JASPAR yes 21259922
chr17 55628979 55628990 FLI1 JASPAR yes 21259923
chr17 55628979 55628990 ELK4 JASPAR yes 54968373
chr17 55628979 55628990 FLI1 JASPAR yes 54968374
chr17 55628980 55628990 GABPA JASPAR yes 21259924
chr17 55628980 55628990 GABPA JASPAR yes 54968375
chr17 55628980 55628993 ELF1 JASPAR yes 21259925
chr17 55628980 55628993 ELF1 JASPAR yes 54968376
chr17 55628982 55629002 TP63 JASPAR yes 21259926
chr17 55628982 55629002 TP63 JASPAR yes 54968377
chr17 55628990 55628994 TEAD2 TRANSFAC yes 21259927
chr17 55628990 55628994 TEAD2 TRANSFAC yes 54968378
chr17 55628993 55629012 PAX5 JASPAR yes 21259928
chr17 55628993 55629012 PAX5 JASPAR yes 54968379
chr17 55629004 55629008 TEAD2 TRANSFAC yes 21259929
chr17 55629004 55629008 TEAD2 TRANSFAC yes 54968380
chr17 55629004 55629009 SP1 TRANSFAC yes 21259930
chr17 55629004 55629009 TBP TRANSFAC yes 21259931
chr17 55629004 55629009 SP1 TRANSFAC yes 54968381
chr17 55629004 55629009 TBP TRANSFAC yes 54968382
chr17 55629007 55629017 SP1 JASPAR yes 21259932
chr17 55629007 55629017 SP1 JASPAR yes 54968383
chr17 55629013 55629023 SP1 JASPAR yes 21259933
chr17 55629013 55629023 SP1 JASPAR yes 54968384
chr17 55629013 55629027 ZIC1 JASPAR yes 21259934
chr17 55629013 55629027 ZIC1 JASPAR yes 54968385
chr17 55629023 55629026 MYB TRANSFAC yes 21259935
chr17 55629023 55629026 MYB TRANSFAC yes 54968386
chr17 55629023 55629037 BATF3 JASPAR yes 21259936
chr17 55629023 55629037 BATF3 JASPAR yes 54968387
chr17 55629034 55629048 TCF7L2 JASPAR yes 21259937
chr17 55629034 55629048 TCF7L2 JASPAR yes 54968388
chr17 55629039 55629048 NKX2-8 JASPAR yes 21259938
chr17 55629039 55629048 NKX2-8 JASPAR yes 54968389
chr17 55629039 55629049 NKX2-3 JASPAR yes 21259939
chr17 55629039 55629049 NKX2-3 JASPAR yes 54968390
chr17 55629043 55629056 ZBTB18 JASPAR yes 21259940
chr17 55629043 55629056 ZBTB18 JASPAR yes 54968391
chr17 55629045 55629054 SNAI2 JASPAR yes 21259941
chr17 55629045 55629054 SNAI2 JASPAR yes 54968392
chr17 55629045 55629055 FIGLA JASPAR yes 21259942
chr17 55629045 55629055 ID4 JASPAR yes 21259943
chr17 55629045 55629055 TCF3 JASPAR yes 21259944
chr17 55629045 55629055 TCF4 JASPAR yes 21259945
chr17 55629045 55629055 FIGLA JASPAR yes 54968393
chr17 55629045 55629055 ID4 JASPAR yes 54968394
chr17 55629045 55629055 TCF3 JASPAR yes 54968395
chr17 55629045 55629055 TCF4 JASPAR yes 54968396
chr17 55629061 55629075 SPI1 JASPAR yes 21259946
chr17 55629061 55629075 SPI1 JASPAR yes 54968397
chr17 55629063 55629066 MYB TRANSFAC yes 21259947
chr17 55629063 55629066 MYB TRANSFAC yes 54968398
chr17 55629073 55629078 GATA2 JASPAR yes 21259948
chr17 55629073 55629078 GATA2 JASPAR yes 54968399
chr17 55629075 55629080 ETS2 TRANSFAC yes 21259949
chr17 55629075 55629080 ETS2 TRANSFAC yes 54968400
chr17 55629078 55629083 MYC TRANSFAC yes 21259950
chr17 55629078 55629083 MYC TRANSFAC yes 54968401
chr17 55629084 55629097 POU2F2 JASPAR yes 21259951
chr17 55629084 55629097 POU2F2 JASPAR yes 54968402
chr17 55629084 55629098 POU1F1 JASPAR yes 21259952
chr17 55629084 55629098 POU1F1 JASPAR yes 54968403
chr17 55629085 55629097 POU3F1 JASPAR yes 21259953
chr17 55629085 55629097 POU3F2 JASPAR yes 21259954
chr17 55629085 55629097 POU3F1 JASPAR yes 54968404
chr17 55629085 55629097 POU3F2 JASPAR yes 54968405
chr17 55629085 55629098 POU3F3 JASPAR yes 21259955
chr17 55629085 55629098 POU3F3 JASPAR yes 54968406
chr17 55629086 55629090 YY1 TRANSFAC yes 21259956
chr17 55629086 55629090 YY1 TRANSFAC yes 54968407
chr17 55629086 55629098 POU2F1 JASPAR yes 21259957
chr17 55629086 55629098 POU2F1 JASPAR yes 54968408
chr17 55629087 55629094 POU2F1 TRANSFAC yes 21259958
chr17 55629087 55629094 POU2F2C TRANSFAC yes 21259959
chr17 55629087 55629094 POU2F2 TRANSFAC yes 21259960
chr17 55629087 55629094 POU2F1 TRANSFAC yes 54968409
chr17 55629087 55629094 POU2F2C TRANSFAC yes 54968410
chr17 55629087 55629094 POU2F2 TRANSFAC yes 54968411
chr17 55629087 55629095 POU2F1 TRANSFAC yes 21259961
chr17 55629087 55629095 POU2F1 TRANSFAC yes 54968412
chr17 55629087 55629096 POU3F4 JASPAR yes 21259962
chr17 55629087 55629096 POU5F1B JASPAR yes 21259963
chr17 55629087 55629096 POU3F4 JASPAR yes 54968413
chr17 55629087 55629096 POU5F1B JASPAR yes 54968414
chr17 55629095 55629101 HiNF-A TRANSFAC yes 21259964
chr17 55629095 55629101 HiNF-A TRANSFAC yes 54968415
chr17 55629096 55629103 JUN TRANSFAC yes 21259965
chr17 55629096 55629103 SP1 TRANSFAC yes 21259966
chr17 55629096 55629103 JUN TRANSFAC yes 54968416
chr17 55629096 55629103 SP1 TRANSFAC yes 54968417
chr17 55629118 55629128 TBX21 JASPAR yes 21259967
chr17 55629118 55629128 TBX21 JASPAR yes 54968418
chr17 55629118 55629129 TBX20 JASPAR yes 21259968
chr17 55629118 55629129 TBX20 JASPAR yes 54968419
chr17 55629119 55629127 TBX15 JASPAR yes 21259969
chr17 55629119 55629127 TBX15 JASPAR yes 54968420
chr17 55629119 55629130 E2F6 JASPAR yes 21259970
chr17 55629119 55629130 E2F6 JASPAR yes 54968421
chr17 55629120 55629125 SP1 TRANSFAC yes 21259971
chr17 55629120 55629125 SP1 TRANSFAC yes 54968422
chr17 55629123 55629128 ETS2 TRANSFAC yes 21259972
chr17 55629123 55629128 ETS2 TRANSFAC yes 54968423
chr17 55629126 55629131 ETS2 TRANSFAC yes 21259973
chr17 55629126 55629131 ETS2 TRANSFAC yes 54968424
chr17 55629126 55629134 EHF JASPAR yes 21259974
chr17 55629126 55629134 EHF JASPAR yes 54968425
chr17 55629142 55629150 NR4A2 JASPAR yes 21259975
chr17 55629142 55629150 NR4A2 JASPAR yes 54968426
chr17 55629145 55629153 SP1 TRANSFAC yes 21259976
chr17 55629145 55629153 WT1 TRANSFAC yes 21259977
chr17 55629145 55629153 SP1 TRANSFAC yes 54968427
chr17 55629145 55629153 WT1 TRANSFAC yes 54968428
chr17 55629147 55629154 SP1 TRANSFAC yes 21259978
chr17 55629147 55629154 SP1 TRANSFAC yes 54968429
chr17 55629149 55629154 SP1 TRANSFAC yes 21259979
chr17 55629149 55629154 SP1 TRANSFAC yes 54968430
chr17 55629162 55629170 FOXO3 JASPAR yes 21259980
chr17 55629162 55629170 FOXO3 JASPAR yes 54968431
chr17 55629165 55629169 H4TF2 TRANSFAC yes 21259981
chr17 55629165 55629169 H4TF2 TRANSFAC yes 54968432
chr17 55629178 55629192 GLIS2 JASPAR yes 21259982
chr17 55629178 55629192 GLIS2 JASPAR yes 54968433
chr17 55629180 55629195 TFAP2A JASPAR yes 21259983
chr17 55629180 55629195 TFAP2A JASPAR yes 54968434
chr17 55629181 55629192 TFAP2A JASPAR yes 21259984
chr17 55629181 55629192 TFAP2C JASPAR yes 21259985
chr17 55629181 55629192 TFAP2A JASPAR yes 54968435
chr17 55629181 55629192 TFAP2C JASPAR yes 54968436
chr17 55629181 55629193 INSM1 JASPAR yes 21259986
chr17 55629181 55629193 INSM1 JASPAR yes 54968437
chr17 55629187 55629191 LFA1 TRANSFAC yes 21259987
chr17 55629187 55629191 LFA1 TRANSFAC yes 54968438
chr17 55629200 55629204 NFE TRANSFAC yes 21259988
chr17 55629200 55629204 NFE TRANSFAC yes 54968439
chr17 55629213 55629224 NRL JASPAR yes 21259989
chr17 55629213 55629224 NRL JASPAR yes 54968440
chr17 55629213 55629228 MAFK JASPAR yes 21259990
chr17 55629213 55629228 MAFK JASPAR yes 54968441
chr17 55629233 55629247 STAT1 JASPAR yes 21259991
chr17 55629233 55629247 STAT1 JASPAR yes 54968442
chr17 55629233 55629248 STAT2 JASPAR yes 21259992
chr17 55629233 55629248 STAT2 JASPAR yes 54968443
chr17 55629239 55629244 SP1 TRANSFAC yes 21259993
chr17 55629239 55629244 SP1 TRANSFAC yes 54968444
chr17 55629247 55629259 PKNOX1 JASPAR yes 21259994
chr17 55629247 55629259 PKNOX2 JASPAR yes 21259995
chr17 55629247 55629259 TGIF1 JASPAR yes 21259996
chr17 55629247 55629259 TGIF2 JASPAR yes 21259997
chr17 55629247 55629259 PKNOX1 JASPAR yes 54968445
chr17 55629247 55629259 PKNOX2 JASPAR yes 54968446
chr17 55629247 55629259 TGIF1 JASPAR yes 54968447
chr17 55629247 55629259 TGIF2 JASPAR yes 54968448
chr17 55629248 55629258 NEUROG2 JASPAR yes 21259998
chr17 55629248 55629258 NEUROG2 JASPAR yes 54968449
chr17 55629249 55629254 MYC TRANSFAC yes 21259999
chr17 55629249 55629254 USF1 TRANSFAC yes 21260000
chr17 55629249 55629254 USF2 TRANSFAC yes 21260001
chr17 55629249 55629254 MYC TRANSFAC yes 54968450
chr17 55629249 55629254 USF1 TRANSFAC yes 54968451
chr17 55629249 55629254 USF2 TRANSFAC yes 54968452
chr17 55629269 55629278 HIC2 JASPAR yes 21260002
chr17 55629269 55629278 HIC2 JASPAR yes 54968453
chr17 55629272 55629293 ZNF263 JASPAR yes 21260003
chr17 55629272 55629293 ZNF263 JASPAR yes 54968454
SNP sites on vista25238[chr17:55628691-55629280]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 55628698 rs79149976 G C
SP1
4951081
chr17 55628826 rs116964407 G A,C
EBF1
4951082
chr17 55628922 rs150788337 G A
EBF1 POU2F2 RUNX3
4951083
chr17 55628955 rs114934850 A G
EBF1 POU2F2 RUNX3
4951084
chr17 55628961 rs139210832 A C
EBF1 POU2F2 RUNX3
4951085
chr17 55628976 rs149918452 C A
EBF1 POU2F2 RUNX3 SP1 ZNF263 ZNF740
4951086
chr17 55629085 rs16958521 G A
EBF1 POU1F1 POU2F2 POU3F1 POU3F2 POU3F3 RUNX3
4951087
chr17 55629142 rs188385581 A G
NR4A2 POU2F2 RUNX3
4951088
chr17 55629150 rs567511892 C T
NR4A2 POU2F2 RUNX3 SP1 WT1
4951089
chr17 55629176 rs553106588 G A
POU2F2 RUNX3
4951090
chr17 55629184 rs185061976 C T
GLIS2 INSM1 POU2F2 TFAP2A TFAP2C
4951091
Genes possibly regulated by vista25238[chr17:55628691-55629280]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista25238[chr17:55628691-55629280]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results