EnhancerDB
  1. Home
  2. SNP
  3. rs116964407[chr17:55628826]
Enhancers that have rs116964407[chr17:55628826]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr17 55628691 55629280 vista25238
VISTA
Transcript factors that have rs116964407[chr17:55628826]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55628729 55629059 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773610
chr17 55628729 55629059 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274159
chr17 55628735 55629065 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773611
chr17 55628735 55629065 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274160
chr17 55628745 55629069 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773612
chr17 55628745 55629069 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274161
chr17 55628750 55629134 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108274162
chr17 55628775 55629139 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773613
chr17 55628775 55629139 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274163
chr17 55628817 55629133 EBF1 UCSC Txn Factor no Conserved 108274164
chr17 55628821 55629201 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773614
chr17 55628821 55629201 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274165
chr17 55628825 55629089 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773615
chr17 55628825 55629089 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274166
Genes associated with rs116964407[chr17:55628826], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More