EnhancerDB
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  3. rs16958521[chr17:55629085]
Enhancers that have rs16958521[chr17:55629085]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr17 55628691 55629280 vista25238
VISTA
Transcript factors that have rs16958521[chr17:55629085]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55628750 55629134 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108274162
chr17 55628775 55629139 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773613
chr17 55628775 55629139 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274163
chr17 55628817 55629133 EBF1 UCSC Txn Factor no Conserved 108274164
chr17 55628821 55629201 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773614
chr17 55628821 55629201 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274165
chr17 55628825 55629089 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773615
chr17 55628825 55629089 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274166
chr17 55628832 55629122 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773616
chr17 55628832 55629122 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274167
chr17 55628834 55629178 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773617
chr17 55628834 55629178 RUNX3 UCSC Txn Factor no Conserved 108274168
chr17 55628834 55629178 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274169
chr17 55628838 55629248 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773619
chr17 55628838 55629248 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274171
chr17 55628841 55629134 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773620
chr17 55628841 55629134 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274172
chr17 55628842 55629133 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773621
chr17 55628842 55629133 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274173
chr17 55628860 55629140 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773623
chr17 55628860 55629140 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274175
chr17 55628866 55629108 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773624
chr17 55628866 55629108 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274176
chr17 55628897 55629175 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773627
chr17 55628897 55629175 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274179
chr17 55628911 55629507 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773628
chr17 55628911 55629507 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274180
chr17 55628912 55629222 POU2F2 UCSC Txn Factor no Conserved 108274181
chr17 55628929 55629119 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773629
chr17 55628929 55629119 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274182
chr17 55628933 55629193 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274183
chr17 55628976 55629186 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773631
chr17 55628976 55629186 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274185
chr17 55629084 55629097 POU2F2 JASPAR yes 21259951
chr17 55629084 55629097 POU2F2 JASPAR yes 54968402
chr17 55629084 55629098 POU1F1 JASPAR yes 21259952
chr17 55629084 55629098 POU1F1 JASPAR yes 54968403
chr17 55629085 55629097 POU3F1 JASPAR yes 21259953
chr17 55629085 55629097 POU3F2 JASPAR yes 21259954
chr17 55629085 55629097 POU3F1 JASPAR yes 54968404
chr17 55629085 55629097 POU3F2 JASPAR yes 54968405
chr17 55629085 55629098 POU3F3 JASPAR yes 21259955
chr17 55629085 55629098 POU3F3 JASPAR yes 54968406
Genes associated with rs16958521[chr17:55629085], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More