EnhancerDB
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  3. vista25266[chr17:55993641-55993992]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25266[chr17:55993641-55993992]
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Tissue distribution of vista25266
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Transcription factor that possibly regulate vista25266[chr17:55993641-55993992]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 55993640 55993655 TFAP2A JASPAR yes 21261262
chr17 55993640 55993655 TFAP2C JASPAR yes 21261263
chr17 55993640 55993655 TFAP2A JASPAR yes 54998810
chr17 55993640 55993655 TFAP2C JASPAR yes 54998811
chr17 55993641 55993652 TFAP2A JASPAR yes 21261264
chr17 55993641 55993652 TFAP2B JASPAR yes 21261265
chr17 55993641 55993652 TFAP2C JASPAR yes 21261266
chr17 55993641 55993652 TFAP2A JASPAR yes 54998812
chr17 55993641 55993652 TFAP2B JASPAR yes 54998813
chr17 55993641 55993652 TFAP2C JASPAR yes 54998814
chr17 55993652 55993661 THAP1 JASPAR yes 21261267
chr17 55993652 55993661 THAP1 JASPAR yes 54998815
chr17 55993655 55993659 LFA1 TRANSFAC yes 21261268
chr17 55993655 55993659 LFA1 TRANSFAC yes 54998816
chr17 55993655 55993675 TP63 JASPAR yes 21261269
chr17 55993655 55993675 TP63 JASPAR yes 54998817
chr17 55993682 55993693 NFKB1 JASPAR yes 21261270
chr17 55993682 55993693 NFKB1 JASPAR yes 54998818
chr17 55993684 55993697 SMAD2 JASPAR yes 21261271
chr17 55993684 55993697 SMAD2 JASPAR yes 54998819
chr17 55993686 55993697 E2F6 JASPAR yes 21261272
chr17 55993686 55993697 E2F6 JASPAR yes 54998820
chr17 55993692 55993706 PLAG1 JASPAR yes 21261273
chr17 55993692 55993706 PLAG1 JASPAR yes 54998821
chr17 55993699 55993712 TFAP2B JASPAR yes 21261274
chr17 55993699 55993712 TFAP2B JASPAR yes 54998822
chr17 55993701 55993715 PLAG1 JASPAR yes 21261275
chr17 55993701 55993715 PLAG1 JASPAR yes 54998823
chr17 55993718 55993729 FLI1 JASPAR yes 21261276
chr17 55993718 55993729 FLI1 JASPAR yes 54998824
chr17 55993719 55993729 GABPA JASPAR yes 21261277
chr17 55993719 55993729 GABPA JASPAR yes 54998825
chr17 55993725 55993729 NFE TRANSFAC yes 21261278
chr17 55993725 55993729 NFE TRANSFAC yes 54998826
chr17 55993740 55993746 NFE2 TRANSFAC yes 21261279
chr17 55993740 55993746 NFE2 TRANSFAC yes 54998827
chr17 55993744 55993750 SP1 TRANSFAC yes 21261280
chr17 55993744 55993750 SP1 TRANSFAC yes 54998828
chr17 55993744 55993754 SP1 JASPAR yes 21261281
chr17 55993744 55993754 SP1 JASPAR yes 54998829
chr17 55993747 55993757 SP1 JASPAR yes 21261282
chr17 55993747 55993757 SP1 JASPAR yes 54998830
chr17 55993752 55993767 LEF1 JASPAR yes 21261283
chr17 55993752 55993767 LEF1 JASPAR yes 54998831
chr17 55993753 55993767 TCF7L2 JASPAR yes 21261284
chr17 55993753 55993767 TCF7L2 JASPAR yes 54998832
chr17 55993756 55993762 LEF1 TRANSFAC yes 21261285
chr17 55993756 55993762 TCF4 TRANSFAC yes 21261286
chr17 55993756 55993762 LEF1 TRANSFAC yes 54998833
chr17 55993756 55993762 TCF4 TRANSFAC yes 54998834
chr17 55993758 55993766 RHOXF1 JASPAR yes 21261287
chr17 55993758 55993766 RHOXF1 JASPAR yes 54998835
chr17 55993768 55993783 NR2C2 JASPAR yes 21261288
chr17 55993768 55993783 NR2C2 JASPAR yes 54998836
chr17 55993770 55993780 SP1 JASPAR yes 21261289
chr17 55993770 55993780 SP1 JASPAR yes 54998837
chr17 55993771 55993781 SP1 JASPAR yes 21261290
chr17 55993771 55993781 SP1 JASPAR yes 54998838
chr17 55993772 55993778 MAZ TRANSFAC yes 21261291
chr17 55993772 55993778 MAZ TRANSFAC yes 54998839
chr17 55993774 55993784 ZNF740 JASPAR yes 21261292
chr17 55993774 55993784 ZNF740 JASPAR yes 54998840
chr17 55993776 55993797 ZNF263 JASPAR yes 21261293
chr17 55993776 55993797 ZNF263 JASPAR yes 54998841
chr17 55993777 55993792 HNF4G JASPAR yes 21261294
chr17 55993777 55993792 HNF4G JASPAR yes 54998842
chr17 55993792 55993802 NFKB1 JASPAR yes 21261295
chr17 55993792 55993802 NFKB1 JASPAR yes 54998843
chr17 55993798 55993804 MZF1 JASPAR yes 21261296
chr17 55993798 55993804 MZF1 JASPAR yes 54998844
chr17 55993799 55993813 PLAG1 JASPAR yes 21261297
chr17 55993799 55993813 PLAG1 JASPAR yes 54998845
chr17 55993803 55993813 NFIA JASPAR yes 21261298
chr17 55993803 55993813 NFIA JASPAR yes 54998846
chr17 55993804 55993813 NFIX JASPAR yes 21261299
chr17 55993804 55993813 NFIX JASPAR yes 54998847
chr17 55993805 55993811 NFIC JASPAR yes 21261300
chr17 55993805 55993811 NFIC JASPAR yes 54998848
chr17 55993807 55993821 ONECUT1 JASPAR yes 21261301
chr17 55993807 55993821 ONECUT2 JASPAR yes 21261302
chr17 55993807 55993821 ONECUT1 JASPAR yes 54998849
chr17 55993807 55993821 ONECUT2 JASPAR yes 54998850
chr17 55993836 55993842 SOX10 JASPAR yes 21261303
chr17 55993836 55993842 SOX10 JASPAR yes 54998851
chr17 55993844 55993854 FIGLA JASPAR yes 21261304
chr17 55993844 55993854 ID4 JASPAR yes 21261305
chr17 55993844 55993854 TCF3 JASPAR yes 21261306
chr17 55993844 55993854 TCF4 JASPAR yes 21261307
chr17 55993844 55993854 FIGLA JASPAR yes 54998852
chr17 55993844 55993854 ID4 JASPAR yes 54998853
chr17 55993844 55993854 TCF3 JASPAR yes 54998854
chr17 55993844 55993854 TCF4 JASPAR yes 54998855
chr17 55993845 55993854 SNAI2 JASPAR yes 21261308
chr17 55993845 55993854 SNAI2 JASPAR yes 54998856
chr17 55993846 55993851 USF2 TRANSFAC yes 21261309
chr17 55993846 55993851 USF2 TRANSFAC yes 54998857
chr17 55993846 55993865 RFX2 JASPAR yes 21261310
chr17 55993846 55993865 RFX2 JASPAR yes 54998858
chr17 55993847 55993853 PTF TRANSFAC yes 21261311
chr17 55993847 55993853 PTF TRANSFAC yes 54998859
chr17 55993850 55993858 FOXO3 JASPAR yes 21261312
chr17 55993850 55993858 FOXO3 JASPAR yes 54998860
chr17 55993850 55993860 NFATC3 JASPAR yes 21261313
chr17 55993850 55993860 NFATC3 JASPAR yes 54998861
chr17 55993850 55993866 RFX2 JASPAR yes 21261314
chr17 55993850 55993866 RFX3 JASPAR yes 21261315
chr17 55993850 55993866 RFX4 JASPAR yes 21261316
chr17 55993850 55993866 RFX5 JASPAR yes 21261317
chr17 55993850 55993866 RFX2 JASPAR yes 54998862
chr17 55993850 55993866 RFX3 JASPAR yes 54998863
chr17 55993850 55993866 RFX4 JASPAR yes 54998864
chr17 55993850 55993866 RFX5 JASPAR yes 54998865
chr17 55993851 55993870 RFX2 JASPAR yes 21261318
chr17 55993851 55993870 RFX2 JASPAR yes 54998866
chr17 55993871 55993876 ETS2 TRANSFAC yes 21261319
chr17 55993871 55993876 ETS2 TRANSFAC yes 54998867
chr17 55993878 55993899 ZNF263 JASPAR yes 21261320
chr17 55993878 55993899 ZNF263 JASPAR yes 54998868
chr17 55993879 55993884 ETS2 TRANSFAC yes 21261321
chr17 55993879 55993884 ETS2 TRANSFAC yes 54998869
chr17 55993897 55993903 HiNF-A TRANSFAC yes 21261322
chr17 55993897 55993903 HiNF-A TRANSFAC yes 54998870
chr17 55993903 55993923 RREB1 JASPAR yes 21261323
chr17 55993903 55993923 RREB1 JASPAR yes 54998871
chr17 55993921 55993938 ESR1 JASPAR yes 21261324
chr17 55993921 55993938 ESR1 JASPAR yes 54998872
chr17 55993931 55993941 CUX1 JASPAR yes 21261325
chr17 55993931 55993941 CUX2 JASPAR yes 21261326
chr17 55993931 55993941 CUX1 JASPAR yes 54998873
chr17 55993931 55993941 CUX2 JASPAR yes 54998874
chr17 55993936 55993947 GCM1 JASPAR yes 21261327
chr17 55993936 55993947 GCM1 JASPAR yes 54998875
chr17 55993938 55993947 THAP1 JASPAR yes 21261328
chr17 55993938 55993947 THAP1 JASPAR yes 54998876
chr17 55993959 55993969 GABPA JASPAR yes 21261329
chr17 55993959 55993969 GABPA JASPAR yes 54998877
chr17 55993965 55993979 SPIC JASPAR yes 21261330
chr17 55993965 55993979 SPIC JASPAR yes 54998878
chr17 55993971 55993977 ETS1 JASPAR yes 21261331
chr17 55993971 55993977 SPI1 JASPAR yes 21261332
chr17 55993971 55993977 ETS1 JASPAR yes 54998879
chr17 55993971 55993977 SPI1 JASPAR yes 54998880
chr17 55993974 55993988 TCF7L2 JASPAR yes 21261333
chr17 55993974 55993988 TCF7L2 JASPAR yes 54998881
chr17 55993974 55993989 LEF1 JASPAR yes 21261334
chr17 55993974 55993989 LEF1 JASPAR yes 54998882
chr17 55993975 55993989 RXRG JASPAR yes 21261335
chr17 55993975 55993989 RXRG JASPAR yes 54998883
chr17 55993978 55993984 TCF4 TRANSFAC yes 21261336
chr17 55993978 55993984 TCF4 TRANSFAC yes 54998884
chr17 55993980 55993993 DUXA JASPAR yes 21261337
chr17 55993980 55993993 DUXA JASPAR yes 54998885
chr17 55993981 55993992 DUX4 JASPAR yes 21261338
chr17 55993981 55993992 DUX4 JASPAR yes 54998886
chr17 55993992 55993998 ZNF354C JASPAR yes 21261339
chr17 55993992 55993998 ZNF354C JASPAR yes 54998887
SNP sites on vista25266[chr17:55993641-55993992]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 55993701 rs566176711 GCC G
PLAG1 TFAP2B
4954342
chr17 55993805 rs186376256 C T
NFIA NFIC NFIX PLAG1
4954343
chr17 55993936 rs190765413 C A,T
CUX1 CUX2 ESR1 GCM1
4954344
chr17 55993972 rs142489310 C T
ETS1 SPI1 SPIC
4954345
Genes possibly regulated by vista25266[chr17:55993641-55993992]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 55916842 55927417 - MRPS23 ENSG00000181610.8 55927417 0.7 0.99 16074 33776
chr17 55938604 56032684 - CUEDC1 ENSG00000180891.8 56032684 0.72 1.0 16075 61308
chr17 56048910 56065620 - VEZF1 ENSG00000136451.4 56065620 0.72 1.0 16076 28372
chr17 56066399 56082614 - RP11-159D12.5 ENSG00000266086.1 56082614 0.91 0.79 16077 11378
chr17 56080721 56084707 - SRSF1 ENSG00000136450.8 56084707 0.64 0.99 16078 9285
Expression level of Genes
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miRNAs possibly regulated by vista25266[chr17:55993641-55993992]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results