EnhancerDB
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Enhancers that have rs566176711[chr17:55993701]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 55993641 55993992 vista25266
VISTA
Transcript factors that have rs566176711[chr17:55993701]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55993282 55993862 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21773863
chr17 55993282 55993862 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274757
chr17 55993692 55993706 PLAG1 JASPAR yes 21261273
chr17 55993692 55993706 PLAG1 JASPAR yes 54998821
chr17 55993699 55993712 TFAP2B JASPAR yes 21261274
chr17 55993699 55993712 TFAP2B JASPAR yes 54998822
chr17 55993701 55993715 PLAG1 JASPAR yes 21261275
chr17 55993701 55993715 PLAG1 JASPAR yes 54998823
Genes associated with rs566176711[chr17:55993701], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More