EnhancerDB
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  3. rs142489310[chr17:55993972]
Enhancers that have rs142489310[chr17:55993972]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 55993641 55993992 vista25266
VISTA
Transcript factors that have rs142489310[chr17:55993972]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55993715 55994385 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21773864
chr17 55993715 55994385 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274758
chr17 55993965 55993979 SPIC JASPAR yes 21261330
chr17 55993965 55993979 SPIC JASPAR yes 54998878
chr17 55993971 55993977 ETS1 JASPAR yes 21261331
chr17 55993971 55993977 SPI1 JASPAR yes 21261332
chr17 55993971 55993977 ETS1 JASPAR yes 54998879
chr17 55993971 55993977 SPI1 JASPAR yes 54998880
Genes associated with rs142489310[chr17:55993972], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More