EnhancerDB
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  3. rs190765413[chr17:55993936]
Enhancers that have rs190765413[chr17:55993936]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 55993641 55993992 vista25266
VISTA
Transcript factors that have rs190765413[chr17:55993936]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55993715 55994385 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21773864
chr17 55993715 55994385 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274758
chr17 55993921 55993938 ESR1 JASPAR yes 21261324
chr17 55993921 55993938 ESR1 JASPAR yes 54998872
chr17 55993931 55993941 CUX1 JASPAR yes 21261325
chr17 55993931 55993941 CUX2 JASPAR yes 21261326
chr17 55993931 55993941 CUX1 JASPAR yes 54998873
chr17 55993931 55993941 CUX2 JASPAR yes 54998874
chr17 55993936 55993947 GCM1 JASPAR yes 21261327
chr17 55993936 55993947 GCM1 JASPAR yes 54998875
Genes associated with rs190765413[chr17:55993936], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More