EnhancerDB
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  3. vista2796[chr1:108479405-108480123]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2796[chr1:108479405-108480123]
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Tissue distribution of vista2796
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Transcription factor that possibly regulate vista2796[chr1:108479405-108480123]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 108479121 108479410 RUNX3 UCSC Txn Factor no Conserved 107817712
chr1 108479121 108479410 RUNX3 UCSC Txn Factor no Conserved 107817713
chr1 108479409 108479420 FLI1 JASPAR yes 31370511
chr1 108479409 108479420 FLI1 JASPAR yes 118344318
chr1 108479410 108479420 GABPA JASPAR yes 31370512
chr1 108479410 108479420 GABPA JASPAR yes 118344319
chr1 108479410 108479423 ELF1 JASPAR yes 31370513
chr1 108479410 108479423 ELF1 JASPAR yes 118344320
chr1 108479411 108479418 SPI1 JASPAR yes 31370514
chr1 108479411 108479418 SPI1 JASPAR yes 118344321
chr1 108479411 108479419 FEV JASPAR yes 31370515
chr1 108479411 108479419 FEV JASPAR yes 118344322
chr1 108479413 108479418 ETS2 TRANSFAC yes 31370516
chr1 108479413 108479418 ETS2 TRANSFAC yes 118344323
chr1 108479441 108479452 NFE2 JASPAR yes 31370517
chr1 108479441 108479452 NFE2 JASPAR yes 118344324
chr1 108479453 108479468 RUNX2 JASPAR yes 31370518
chr1 108479453 108479468 RUNX2 JASPAR yes 118344325
chr1 108479454 108479463 RUNX2 JASPAR yes 31370519
chr1 108479454 108479463 RUNX2 JASPAR yes 118344326
chr1 108479454 108479464 RUNX3 JASPAR yes 31370520
chr1 108479454 108479464 RUNX3 JASPAR yes 118344327
chr1 108479454 108479465 RUNX1 JASPAR yes 31370521
chr1 108479454 108479465 RUNX1 JASPAR yes 118344328
chr1 108479468 108479477 ZEB1 JASPAR yes 31370522
chr1 108479468 108479477 ZEB1 JASPAR yes 118344329
chr1 108479468 108479483 SCRT1 JASPAR yes 31370523
chr1 108479468 108479483 SCRT1 JASPAR yes 118344330
chr1 108479469 108479479 FIGLA JASPAR yes 31370524
chr1 108479469 108479479 ID4 JASPAR yes 31370525
chr1 108479469 108479479 TCF3 JASPAR yes 31370526
chr1 108479469 108479479 TCF4 JASPAR yes 31370527
chr1 108479469 108479479 FIGLA JASPAR yes 118344331
chr1 108479469 108479479 ID4 JASPAR yes 118344332
chr1 108479469 108479479 TCF3 JASPAR yes 118344333
chr1 108479469 108479479 TCF4 JASPAR yes 118344334
chr1 108479470 108479479 SNAI2 JASPAR yes 31370528
chr1 108479470 108479479 SNAI2 JASPAR yes 118344335
chr1 108479471 108479476 USF2 TRANSFAC yes 31370529
chr1 108479471 108479476 USF2 TRANSFAC yes 118344336
chr1 108479474 108479492 ESR2 JASPAR yes 31370530
chr1 108479474 108479492 ESR2 JASPAR yes 118344337
chr1 108479475 108479492 ESR1 JASPAR yes 31370531
chr1 108479475 108479492 ESR1 JASPAR yes 118344338
chr1 108479476 108479491 ESR2 JASPAR yes 31370532
chr1 108479476 108479491 ESR2 JASPAR yes 118344339
chr1 108479487 108479497 SP1 JASPAR yes 31370533
chr1 108479487 108479497 SP1 JASPAR yes 118344340
chr1 108479511 108479522 DMRT3 JASPAR yes 31370534
chr1 108479511 108479522 DMRT3 JASPAR yes 118344341
chr1 108479516 108479532 ZNF143 JASPAR yes 31370535
chr1 108479516 108479532 ZNF143 JASPAR yes 118344342
chr1 108479522 108479540 SRF JASPAR yes 31370536
chr1 108479522 108479540 SRF JASPAR yes 118344343
chr1 108479525 108479530 ETS2 TRANSFAC yes 31370537
chr1 108479525 108479530 ETS2 TRANSFAC yes 118344344
chr1 108479533 108479538 ETS2 TRANSFAC yes 31370538
chr1 108479533 108479538 ETS2 TRANSFAC yes 118344345
chr1 108479533 108479541 EHF JASPAR yes 31370539
chr1 108479533 108479541 EHF JASPAR yes 118344346
chr1 108479552 108479556 LFA1 TRANSFAC yes 31370540
chr1 108479552 108479556 LFA1 TRANSFAC yes 118344347
chr1 108479557 108479572 PRDM1 JASPAR yes 31370541
chr1 108479557 108479572 PRDM1 JASPAR yes 118344348
chr1 108479563 108479570 NKX3-1 JASPAR yes 31370542
chr1 108479563 108479570 NKX3-1 JASPAR yes 118344349
chr1 108479585 108479589 ESR1 TRANSFAC yes 31370543
chr1 108479585 108479589 ESR1 TRANSFAC yes 118344350
chr1 108479590 108479595 H4TF1 TRANSFAC yes 31370544
chr1 108479590 108479595 H4TF1 TRANSFAC yes 118344351
chr1 108479604 108479614 ERF JASPAR yes 31370545
chr1 108479604 108479614 ERF JASPAR yes 118344352
chr1 108479605 108479613 FEV JASPAR yes 31370546
chr1 108479605 108479613 FEV JASPAR yes 118344353
chr1 108479613 108479619 MAZ TRANSFAC yes 31370547
chr1 108479613 108479619 MAZ TRANSFAC yes 118344354
chr1 108479615 108479635 PPARG JASPAR yes 31370548
chr1 108479615 108479635 PPARG JASPAR yes 118344355
chr1 108479620 108479624 H1TF2 TRANSFAC yes 31370549
chr1 108479620 108479624 NFE TRANSFAC yes 31370550
chr1 108479620 108479624 SRF TRANSFAC yes 31370551
chr1 108479620 108479624 H1TF2 TRANSFAC yes 118344356
chr1 108479620 108479624 NFE TRANSFAC yes 118344357
chr1 108479620 108479624 SRF TRANSFAC yes 118344358
chr1 108479641 108479649 TBX5 JASPAR yes 31370552
chr1 108479641 108479649 TBX5 JASPAR yes 118344359
chr1 108479641 108479661 RREB1 JASPAR yes 31370553
chr1 108479641 108479661 RREB1 JASPAR yes 118344360
chr1 108479666 108479683 BCL6B JASPAR yes 31370554
chr1 108479666 108479683 BCL6B JASPAR yes 118344361
chr1 108479688 108479703 MEF2A JASPAR yes 31370555
chr1 108479688 108479703 MEF2A JASPAR yes 118344362
chr1 108479689 108479697 FOXO3 JASPAR yes 31370556
chr1 108479689 108479697 FOXO3 JASPAR yes 118344363
chr1 108479691 108479699 FOXL1 JASPAR yes 31370557
chr1 108479691 108479699 FOXL1 JASPAR yes 118344364
chr1 108479692 108479712 RREB1 JASPAR yes 31370558
chr1 108479692 108479712 RREB1 JASPAR yes 118344365
chr1 108479695 108479706 TBX20 JASPAR yes 31370559
chr1 108479695 108479706 TBX20 JASPAR yes 118344366
chr1 108479697 108479700 MYB TRANSFAC yes 31370560
chr1 108479697 108479700 MYB TRANSFAC yes 118344367
chr1 108479699 108479719 RREB1 JASPAR yes 31370561
chr1 108479699 108479719 RREB1 JASPAR yes 118344368
chr1 108479710 108479730 RREB1 JASPAR yes 31370562
chr1 108479710 108479730 RREB1 JASPAR yes 118344369
chr1 108479715 108479735 RREB1 JASPAR yes 31370563
chr1 108479715 108479735 RREB1 JASPAR yes 118344370
chr1 108479734 108479747 EOMES JASPAR yes 31370564
chr1 108479734 108479747 EOMES JASPAR yes 118344371
chr1 108479736 108479746 TBR1 JASPAR yes 31370565
chr1 108479736 108479746 TBR1 JASPAR yes 118344372
chr1 108479736 108479747 TBX20 JASPAR yes 31370566
chr1 108479736 108479747 TBX2 JASPAR yes 31370567
chr1 108479736 108479747 TBX20 JASPAR yes 118344373
chr1 108479736 108479747 TBX2 JASPAR yes 118344374
chr1 108479737 108479747 SREBF2 JASPAR yes 31370568
chr1 108479737 108479747 TBX21 JASPAR yes 31370569
chr1 108479737 108479747 SREBF2 JASPAR yes 118344375
chr1 108479737 108479747 TBX21 JASPAR yes 118344376
chr1 108479738 108479746 MGA JASPAR yes 31370570
chr1 108479738 108479746 MGA JASPAR yes 118344377
chr1 108479745 108479753 OTX2 JASPAR yes 31370571
chr1 108479745 108479753 OTX2 JASPAR yes 118344378
chr1 108479746 108479758 GRHL1 JASPAR yes 31370572
chr1 108479746 108479758 GRHL1 JASPAR yes 118344379
chr1 108479756 108479772 POU4F2 JASPAR yes 31370573
chr1 108479756 108479772 POU4F3 JASPAR yes 31370574
chr1 108479756 108479772 POU4F2 JASPAR yes 118344380
chr1 108479756 108479772 POU4F3 JASPAR yes 118344381
chr1 108479757 108479760 MYB TRANSFAC yes 31370575
chr1 108479757 108479760 MYB TRANSFAC yes 118344382
chr1 108479758 108479772 POU4F1 JASPAR yes 31370576
chr1 108479758 108479772 POU4F1 JASPAR yes 118344383
chr1 108479762 108479778 SOX4 JASPAR yes 31370577
chr1 108479762 108479778 SOX4 JASPAR yes 118344384
chr1 108479766 108479776 MAX JASPAR yes 31370578
chr1 108479766 108479776 MAX JASPAR yes 118344385
chr1 108479769 108479780 USF1 JASPAR yes 31370579
chr1 108479769 108479780 USF2 JASPAR yes 31370580
chr1 108479769 108479780 USF1 JASPAR yes 118344386
chr1 108479769 108479780 USF2 JASPAR yes 118344387
chr1 108479781 108479796 RUNX2 JASPAR yes 31370581
chr1 108479781 108479796 RUNX2 JASPAR yes 118344388
chr1 108479782 108479791 RUNX2 JASPAR yes 31370582
chr1 108479782 108479791 RUNX2 JASPAR yes 118344389
chr1 108479782 108479792 RUNX3 JASPAR yes 31370583
chr1 108479782 108479792 RUNX3 JASPAR yes 118344390
chr1 108479782 108479793 RUNX1 JASPAR yes 31370584
chr1 108479782 108479793 RUNX1 JASPAR yes 118344391
chr1 108479791 108479795 YY1 TRANSFAC yes 31370585
chr1 108479791 108479795 YY1 TRANSFAC yes 118344392
chr1 108479823 108479833 TBX21 JASPAR yes 31370586
chr1 108479823 108479833 TBX21 JASPAR yes 118344393
chr1 108479823 108479836 EOMES JASPAR yes 31370587
chr1 108479823 108479836 EOMES JASPAR yes 118344394
chr1 108479831 108479843 POU2F1 JASPAR yes 31370588
chr1 108479831 108479843 POU2F1 JASPAR yes 118344395
chr1 108479831 108479844 POU3F3 JASPAR yes 31370589
chr1 108479831 108479844 POU3F3 JASPAR yes 118344396
chr1 108479831 108479845 POU1F1 JASPAR yes 31370590
chr1 108479831 108479845 POU1F1 JASPAR yes 118344397
chr1 108479832 108479844 POU3F1 JASPAR yes 31370591
chr1 108479832 108479844 POU3F2 JASPAR yes 31370592
chr1 108479832 108479844 POU3F1 JASPAR yes 118344398
chr1 108479832 108479844 POU3F2 JASPAR yes 118344399
chr1 108479833 108479837 YY1 TRANSFAC yes 31370593
chr1 108479833 108479837 YY1 TRANSFAC yes 118344400
chr1 108479833 108479842 POU5F1B JASPAR yes 31370594
chr1 108479833 108479842 POU5F1B JASPAR yes 118344401
chr1 108479902 108479913 FOSL2 JASPAR yes 31370595
chr1 108479902 108479913 FOSL2 JASPAR yes 118344402
chr1 108479903 108479914 FOS JASPAR yes 31370596
chr1 108479903 108479914 FOS JASPAR yes 118344403
chr1 108479904 108479913 JDP2 JASPAR yes 31370597
chr1 108479904 108479913 JDP2 JASPAR yes 118344404
chr1 108479907 108479917 EN2 JASPAR yes 31370598
chr1 108479907 108479917 ESX1 JASPAR yes 31370599
chr1 108479907 108479917 GBX1 JASPAR yes 31370600
chr1 108479907 108479917 GBX2 JASPAR yes 31370601
chr1 108479907 108479917 GSX1 JASPAR yes 31370602
chr1 108479907 108479917 HESX1 JASPAR yes 31370603
chr1 108479907 108479917 HOXB3 JASPAR yes 31370604
chr1 108479907 108479917 LBX2 JASPAR yes 31370605
chr1 108479907 108479917 LHX2 JASPAR yes 31370606
chr1 108479907 108479917 RAX JASPAR yes 31370607
chr1 108479907 108479917 EN2 JASPAR yes 118344405
chr1 108479907 108479917 ESX1 JASPAR yes 118344406
chr1 108479907 108479917 GBX1 JASPAR yes 118344407
chr1 108479907 108479917 GBX2 JASPAR yes 118344408
chr1 108479907 108479917 GSX1 JASPAR yes 118344409
chr1 108479907 108479917 HESX1 JASPAR yes 118344410
chr1 108479907 108479917 HOXB3 JASPAR yes 118344411
chr1 108479907 108479917 LBX2 JASPAR yes 118344412
chr1 108479907 108479917 LHX2 JASPAR yes 118344413
chr1 108479907 108479917 RAX JASPAR yes 118344414
chr1 108479908 108479916 BARX1 JASPAR yes 31370608
chr1 108479908 108479916 BSX JASPAR yes 31370609
chr1 108479908 108479916 EN1 JASPAR yes 31370610
chr1 108479908 108479916 ISX JASPAR yes 31370611
chr1 108479908 108479916 LHX9 JASPAR yes 31370612
chr1 108479908 108479916 MSX1 JASPAR yes 31370613
chr1 108479908 108479916 MSX2 JASPAR yes 31370614
chr1 108479908 108479916 PRRX1 JASPAR yes 31370615
chr1 108479908 108479916 RAX2 JASPAR yes 31370616
chr1 108479908 108479916 SHOX JASPAR yes 31370617
chr1 108479908 108479916 BARX1 JASPAR yes 118344415
chr1 108479908 108479916 BSX JASPAR yes 118344416
chr1 108479908 108479916 EN1 JASPAR yes 118344417
chr1 108479908 108479916 ISX JASPAR yes 118344418
chr1 108479908 108479916 LHX9 JASPAR yes 118344419
chr1 108479908 108479916 MSX1 JASPAR yes 118344420
chr1 108479908 108479916 MSX2 JASPAR yes 118344421
chr1 108479908 108479916 PRRX1 JASPAR yes 118344422
chr1 108479908 108479916 RAX2 JASPAR yes 118344423
chr1 108479908 108479916 SHOX JASPAR yes 118344424
chr1 108479908 108479917 VENTX JASPAR yes 31370618
chr1 108479908 108479917 VENTX JASPAR yes 118344425
chr1 108479908 108479923 NFYB JASPAR yes 31370619
chr1 108479908 108479923 NFYB JASPAR yes 118344426
chr1 108479914 108479918 H4TF2 TRANSFAC yes 31370620
chr1 108479914 108479918 H4TF2 TRANSFAC yes 118344427
chr1 108479932 108479943 FOXH1 JASPAR yes 31370621
chr1 108479932 108479943 FOXH1 JASPAR yes 118344428
chr1 108479978 108479988 MSC JASPAR yes 31370622
chr1 108479978 108479988 MSC JASPAR yes 118344429
chr1 108479986 108479989 MYB TRANSFAC yes 31370623
chr1 108479986 108479989 MYB TRANSFAC yes 118344430
chr1 108479990 108480001 NRL JASPAR yes 31370624
chr1 108479990 108480001 NRL JASPAR yes 118344431
chr1 108480034 108480040 NFIC JASPAR yes 31370625
chr1 108480034 108480040 NFIC JASPAR yes 118344432
chr1 108480040 108480051 GCM1 JASPAR yes 31370626
chr1 108480040 108480051 GCM1 JASPAR yes 118344433
chr1 108480051 108480062 FLI1 JASPAR yes 31370627
chr1 108480051 108480062 FLI1 JASPAR yes 118344434
chr1 108480052 108480056 YY1 TRANSFAC yes 31370628
chr1 108480052 108480056 YY1 TRANSFAC yes 118344435
chr1 108480053 108480061 FEV JASPAR yes 31370629
chr1 108480053 108480061 FEV JASPAR yes 118344436
chr1 108480055 108480060 ETS2 TRANSFAC yes 31370630
chr1 108480055 108480060 ETS2 TRANSFAC yes 118344437
chr1 108480055 108480066 FLI1 JASPAR yes 31370631
chr1 108480055 108480066 FLI1 JASPAR yes 118344438
chr1 108480057 108480065 EHF JASPAR yes 31370632
chr1 108480057 108480065 EHF JASPAR yes 118344439
chr1 108480093 108480108 SOX21 JASPAR yes 31370633
chr1 108480093 108480108 SOX21 JASPAR yes 118344440
chr1 108480093 108480109 SOX4 JASPAR yes 31370634
chr1 108480093 108480109 SOX4 JASPAR yes 118344441
SNP sites on vista2796[chr1:108479405-108480123]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 108479414 rs560828764 T TTCC
ELF1 ETS2 FEV FLI1 GABPA SPI1
540177
chr1 108479417 rs113725687 C G
ELF1 ETS2 FEV FLI1 GABPA SPI1
540178
chr1 108479418 rs536459725 T C
ELF1 ETS2 FEV FLI1 GABPA SPI1
540179
chr1 108479431 rs77088232 A C no 540180
chr1 108479490 rs6680307 C T
ESR1 ESR2 SP1
540181
chr1 108479507 rs145092143 T G no 540182
chr1 108479579 rs12069508 T C no 540183
chr1 108479634 rs540843570 T C
PPARG
540184
chr1 108480024 rs143178784 C T no 540185
chr1 108480050 rs553139075 T A,C
GCM1
540186
Genes possibly regulated by vista2796[chr1:108479405-108480123]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 108113782 108507766 - VAV3 ENSG00000134215.11 108507766 0.95 0.93 954 72357
Expression level of Genes
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miRNAs possibly regulated by vista2796[chr1:108479405-108480123]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results