EnhancerDB
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Enhancers that have rs540843570[chr1:108479634]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 108474065 108488635 enh548
Prostate (PC-3) Epithelial (MCF-7) Blood (T-cell) Lung (PC-9) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Blood (Karpas-422) Muscle (Myoblast) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
chr1 108479405 108480123 vista2796
VISTA
Transcript factors that have rs540843570[chr1:108479634]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 108478988 108479648 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21326390
chr1 108478988 108479648 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107817683
chr1 108478988 108479648 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107817684
chr1 108478995 108479645 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107817685
chr1 108478995 108479645 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107817686
chr1 108479080 108479650 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21326397
chr1 108479080 108479650 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107817704
chr1 108479080 108479650 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107817705
chr1 108479185 108479841 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21326405
chr1 108479185 108479841 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107817727
chr1 108479185 108479841 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107817728
chr1 108479223 108479699 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107817738
chr1 108479223 108479699 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107817739
chr1 108479267 108479737 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21326407
chr1 108479267 108479737 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107817740
chr1 108479267 108479737 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107817741
chr1 108479282 108479852 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21326408
chr1 108479282 108479852 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107817742
chr1 108479282 108479852 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107817743
chr1 108479412 108479642 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107817744
chr1 108479439 108479783 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107817745
chr1 108479588 108479654 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107817746
chr1 108479615 108479635 PPARG JASPAR yes 31370548
chr1 108479615 108479635 PPARG JASPAR yes 118344355
Genes associated with rs540843570[chr1:108479634], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More