EnhancerDB
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Enhancers that have rs560828764[chr1:108479414]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 108474065 108488635 enh548
Prostate (PC-3) Epithelial (MCF-7) Blood (T-cell) Lung (PC-9) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Blood (Karpas-422) Muscle (Myoblast) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
chr1 108479405 108480123 vista2796
VISTA
Transcript factors that have rs560828764[chr1:108479414]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 108478964 108479484 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21326387
chr1 108478964 108479484 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107817677
chr1 108478964 108479484 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107817678
chr1 108478971 108479467 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21326388
chr1 108478971 108479467 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107817679
chr1 108478971 108479467 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107817680
chr1 108478977 108479567 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21326389
chr1 108478977 108479567 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107817681
chr1 108478977 108479567 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107817682
chr1 108478988 108479648 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21326390
chr1 108478988 108479648 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107817683
chr1 108478988 108479648 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107817684
chr1 108478995 108479645 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107817685
chr1 108478995 108479645 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107817686
chr1 108479035 108479555 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21326391
chr1 108479035 108479555 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107817688
chr1 108479035 108479555 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107817689
chr1 108479046 108479550 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107817691
chr1 108479046 108479550 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107817692
chr1 108479058 108479442 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21326393
chr1 108479058 108479442 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107817696
chr1 108479058 108479442 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107817697
chr1 108479062 108479582 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107817698
chr1 108479062 108479582 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107817699
chr1 108479071 108479427 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21326395
chr1 108479071 108479427 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107817701
chr1 108479071 108479427 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107817702
chr1 108479080 108479650 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21326397
chr1 108479080 108479650 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107817704
chr1 108479080 108479650 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107817705
chr1 108479116 108479436 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21326400
chr1 108479116 108479436 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107817710
chr1 108479116 108479436 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107817711
chr1 108479132 108479442 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21326402
chr1 108479132 108479442 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107817718
chr1 108479132 108479442 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107817719
chr1 108479141 108479477 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107817720
chr1 108479141 108479477 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107817721
chr1 108479143 108479473 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107817722
chr1 108479143 108479473 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107817723
chr1 108479185 108479841 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21326405
chr1 108479185 108479841 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107817727
chr1 108479185 108479841 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107817728
chr1 108479196 108479520 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107817730
chr1 108479196 108479520 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107817731
chr1 108479204 108479528 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107817733
chr1 108479204 108479528 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107817734
chr1 108479218 108479468 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107817736
chr1 108479218 108479468 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107817737
chr1 108479223 108479699 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107817738
chr1 108479223 108479699 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107817739
chr1 108479267 108479737 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21326407
chr1 108479267 108479737 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107817740
chr1 108479267 108479737 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107817741
chr1 108479282 108479852 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21326408
chr1 108479282 108479852 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107817742
chr1 108479282 108479852 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107817743
chr1 108479409 108479420 FLI1 JASPAR yes 31370511
chr1 108479409 108479420 FLI1 JASPAR yes 118344318
chr1 108479410 108479420 GABPA JASPAR yes 31370512
chr1 108479410 108479420 GABPA JASPAR yes 118344319
chr1 108479410 108479423 ELF1 JASPAR yes 31370513
chr1 108479410 108479423 ELF1 JASPAR yes 118344320
chr1 108479411 108479418 SPI1 JASPAR yes 31370514
chr1 108479411 108479418 SPI1 JASPAR yes 118344321
chr1 108479411 108479419 FEV JASPAR yes 31370515
chr1 108479411 108479419 FEV JASPAR yes 118344322
chr1 108479412 108479642 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107817744
chr1 108479413 108479418 ETS2 TRANSFAC yes 31370516
chr1 108479413 108479418 ETS2 TRANSFAC yes 118344323
Genes associated with rs560828764[chr1:108479414], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More