EnhancerDB
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  3. rs6680307[chr1:108479490]
Enhancers that have rs6680307[chr1:108479490]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 108474065 108488635 enh548
Prostate (PC-3) Epithelial (MCF-7) Blood (T-cell) Lung (PC-9) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Blood (Karpas-422) Muscle (Myoblast) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
chr1 108479405 108480123 vista2796
VISTA
Transcript factors that have rs6680307[chr1:108479490]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 108478977 108479567 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21326389
chr1 108478977 108479567 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107817681
chr1 108478977 108479567 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107817682
chr1 108478988 108479648 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21326390
chr1 108478988 108479648 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107817683
chr1 108478988 108479648 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107817684
chr1 108478995 108479645 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107817685
chr1 108478995 108479645 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107817686
chr1 108479035 108479555 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21326391
chr1 108479035 108479555 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107817688
chr1 108479035 108479555 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107817689
chr1 108479046 108479550 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107817691
chr1 108479046 108479550 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107817692
chr1 108479062 108479582 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107817698
chr1 108479062 108479582 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107817699
chr1 108479080 108479650 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21326397
chr1 108479080 108479650 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107817704
chr1 108479080 108479650 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107817705
chr1 108479185 108479841 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21326405
chr1 108479185 108479841 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107817727
chr1 108479185 108479841 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107817728
chr1 108479196 108479520 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107817730
chr1 108479196 108479520 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107817731
chr1 108479204 108479528 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107817733
chr1 108479204 108479528 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107817734
chr1 108479223 108479699 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107817738
chr1 108479223 108479699 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107817739
chr1 108479267 108479737 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21326407
chr1 108479267 108479737 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107817740
chr1 108479267 108479737 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107817741
chr1 108479282 108479852 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21326408
chr1 108479282 108479852 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107817742
chr1 108479282 108479852 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107817743
chr1 108479412 108479642 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107817744
chr1 108479439 108479783 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107817745
chr1 108479474 108479492 ESR2 JASPAR yes 31370530
chr1 108479474 108479492 ESR2 JASPAR yes 118344337
chr1 108479475 108479492 ESR1 JASPAR yes 31370531
chr1 108479475 108479492 ESR1 JASPAR yes 118344338
chr1 108479476 108479491 ESR2 JASPAR yes 31370532
chr1 108479476 108479491 ESR2 JASPAR yes 118344339
chr1 108479487 108479497 SP1 JASPAR yes 31370533
chr1 108479487 108479497 SP1 JASPAR yes 118344340
Genes associated with rs6680307[chr1:108479490], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More