EnhancerDB
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  3. vista3389[chr1:154717398-154717575]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3389[chr1:154717398-154717575]
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Tissue distribution of vista3389
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Transcription factor that possibly regulate vista3389[chr1:154717398-154717575]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 154717396 154717417 IRF1 JASPAR yes 32306434
chr1 154717396 154717417 IRF1 JASPAR yes 118373519
chr1 154717399 154717414 FOXP1 JASPAR yes 32306435
chr1 154717399 154717414 FOXP1 JASPAR yes 118373520
chr1 154717400 154717415 FOXP1 JASPAR yes 32306436
chr1 154717400 154717415 FOXP1 JASPAR yes 118373521
chr1 154717401 154717416 FOXP1 JASPAR yes 32306437
chr1 154717401 154717416 FOXP1 JASPAR yes 118373522
chr1 154717401 154717422 IRF1 JASPAR yes 32306438
chr1 154717401 154717422 IRF1 JASPAR yes 118373523
chr1 154717402 154717417 FOXP1 JASPAR yes 32306439
chr1 154717402 154717417 FOXP1 JASPAR yes 118373524
chr1 154717403 154717418 FOXP1 JASPAR yes 32306440
chr1 154717403 154717418 FOXP1 JASPAR yes 118373525
chr1 154717416 154717434 NR3C1 JASPAR yes 32306441
chr1 154717416 154717434 NR3C1 JASPAR yes 118373526
chr1 154717434 154717443 SRY JASPAR yes 32306442
chr1 154717434 154717443 SRY JASPAR yes 118373527
chr1 154717438 154717453 PRDM1 JASPAR yes 32306443
chr1 154717438 154717453 PRDM1 JASPAR yes 118373528
chr1 154717449 154717453 TEAD2 TRANSFAC yes 32306444
chr1 154717449 154717453 TEAD2 TRANSFAC yes 118373529
chr1 154717449 154717454 TBP TRANSFAC yes 32306445
chr1 154717449 154717454 TBP TRANSFAC yes 118373530
chr1 154717450 154717458 FOXG1 JASPAR yes 32306446
chr1 154717450 154717458 FOXG1 JASPAR yes 118373531
chr1 154717461 154717474 POU3F3 JASPAR yes 32306447
chr1 154717461 154717474 POU3F3 JASPAR yes 118373532
chr1 154717461 154717475 POU1F1 JASPAR yes 32306448
chr1 154717461 154717475 POU1F1 JASPAR yes 118373533
chr1 154717462 154717474 POU3F1 JASPAR yes 32306449
chr1 154717462 154717474 POU3F1 JASPAR yes 118373534
chr1 154717462 154717475 POU2F2 JASPAR yes 32306450
chr1 154717462 154717475 POU2F2 JASPAR yes 118373535
chr1 154717476 154717490 TCF7L2 JASPAR yes 32306451
chr1 154717476 154717490 TCF7L2 JASPAR yes 118373536
chr1 154717507 154717511 NFE TRANSFAC yes 32306452
chr1 154717507 154717511 NFE TRANSFAC yes 118373537
chr1 154717513 154717523 MAX JASPAR yes 32306453
chr1 154717513 154717523 MAX JASPAR yes 118373538
chr1 154717513 154717525 HES5 JASPAR yes 32306454
chr1 154717513 154717525 HES5 JASPAR yes 118373539
chr1 154717514 154717524 BHLHE40 JASPAR yes 32306455
chr1 154717514 154717524 CLOCK JASPAR yes 32306456
chr1 154717514 154717524 HEY1 JASPAR yes 32306457
chr1 154717514 154717524 HEY2 JASPAR yes 32306458
chr1 154717514 154717524 MAX JASPAR yes 32306459
chr1 154717514 154717524 MLXIPL JASPAR yes 32306460
chr1 154717514 154717524 MLX JASPAR yes 32306461
chr1 154717514 154717524 MNT JASPAR yes 32306462
chr1 154717514 154717524 TFE3 JASPAR yes 32306463
chr1 154717514 154717524 TFEB JASPAR yes 32306464
chr1 154717514 154717524 BHLHE40 JASPAR yes 118373540
chr1 154717514 154717524 CLOCK JASPAR yes 118373541
chr1 154717514 154717524 HEY1 JASPAR yes 118373542
chr1 154717514 154717524 HEY2 JASPAR yes 118373543
chr1 154717514 154717524 MAX JASPAR yes 118373544
chr1 154717514 154717524 MLXIPL JASPAR yes 118373545
chr1 154717514 154717524 MLX JASPAR yes 118373546
chr1 154717514 154717524 MNT JASPAR yes 118373547
chr1 154717514 154717524 TFE3 JASPAR yes 118373548
chr1 154717514 154717524 TFEB JASPAR yes 118373549
chr1 154717514 154717525 USF2 JASPAR yes 32306465
chr1 154717514 154717525 USF2 JASPAR yes 118373550
chr1 154717515 154717522 USF1 JASPAR yes 32306466
chr1 154717515 154717522 USF1 JASPAR yes 118373551
chr1 154717515 154717525 MAX JASPAR yes 32306467
chr1 154717515 154717525 MAX JASPAR yes 118373552
chr1 154717516 154717521 MYC TRANSFAC yes 32306468
chr1 154717516 154717521 USF1 TRANSFAC yes 32306469
chr1 154717516 154717521 USF2 TRANSFAC yes 32306470
chr1 154717516 154717521 MYC TRANSFAC yes 118373553
chr1 154717516 154717521 USF1 TRANSFAC yes 118373554
chr1 154717516 154717521 USF2 TRANSFAC yes 118373555
chr1 154717542 154717546 TEAD2 TRANSFAC yes 32306471
chr1 154717542 154717546 TEAD2 TRANSFAC yes 118373556
chr1 154717542 154717547 TBP TRANSFAC yes 32306472
chr1 154717542 154717547 TBP TRANSFAC yes 118373557
chr1 154717552 154717558 SP1 TRANSFAC yes 32306473
chr1 154717552 154717558 SP1 TRANSFAC yes 118373558
chr1 154717553 154717574 ZNF263 JASPAR yes 32306474
chr1 154717553 154717574 ZNF263 JASPAR yes 118373559
chr1 154717559 154717565 ZNF354C JASPAR yes 32306475
chr1 154717559 154717565 ZNF354C JASPAR yes 118373560
chr1 154717561 154717570 NKX2-8 JASPAR yes 32306476
chr1 154717561 154717570 NKX2-8 JASPAR yes 118373561
SNP sites on vista3389[chr1:154717398-154717575]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 154717401 rs397981603 CA C
FOXP1 IRF1
640196
chr1 154717401 rs562745783 CA C
FOXP1 IRF1
640197
chr1 154717401 rs5777930 CA C
FOXP1 IRF1
640198
chr1 154717418 rs74115856 T A
FOXP1 IRF1 NR3C1
640199
chr1 154717454 rs183784667 A C
FOXG1 TBP
640200
chr1 154717473 rs527580101 T A
POU1F1 POU2F2 POU3F1 POU3F3
640201
Genes possibly regulated by vista3389[chr1:154717398-154717575]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista3389[chr1:154717398-154717575]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results