EnhancerDB
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  3. rs74115856[chr1:154717418]
Enhancers that have rs74115856[chr1:154717418]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154711786 154726515 enh27142
Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Spleen Neural Stem Cells (H9) Thymus Heart
chr1 154717398 154717575 vista3389
VISTA
Transcript factors that have rs74115856[chr1:154717418]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154717112 154718255 AR GTRD no Prostate (PC-3) 107833239
chr1 154717237 154717777 ZNF274 GTRD no Liver (HepG2) 107833240
chr1 154717310 154717771 ZNF143 GTRD no Epithelial (MCF-7) 21340710
chr1 154717310 154717771 ZNF143 GTRD no Epithelial (MCF-7) 107833241
chr1 154717401 154717422 IRF1 JASPAR yes 32306438
chr1 154717401 154717422 IRF1 JASPAR yes 118373523
chr1 154717403 154717418 FOXP1 JASPAR yes 32306440
chr1 154717403 154717418 FOXP1 JASPAR yes 118373525
chr1 154717416 154717434 NR3C1 JASPAR yes 32306441
chr1 154717416 154717434 NR3C1 JASPAR yes 118373526
Genes associated with rs74115856[chr1:154717418], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More