EnhancerDB
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  3. rs527580101[chr1:154717473]
Enhancers that have rs527580101[chr1:154717473]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154711786 154726515 enh27142
Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Spleen Neural Stem Cells (H9) Thymus Heart
chr1 154717398 154717575 vista3389
VISTA
Transcript factors that have rs527580101[chr1:154717473]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154717112 154718255 AR GTRD no Prostate (PC-3) 107833239
chr1 154717237 154717777 ZNF274 GTRD no Liver (HepG2) 107833240
chr1 154717310 154717771 ZNF143 GTRD no Epithelial (MCF-7) 21340710
chr1 154717310 154717771 ZNF143 GTRD no Epithelial (MCF-7) 107833241
chr1 154717421 154717661 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107833242
chr1 154717461 154717474 POU3F3 JASPAR yes 32306447
chr1 154717461 154717474 POU3F3 JASPAR yes 118373532
chr1 154717461 154717475 POU1F1 JASPAR yes 32306448
chr1 154717461 154717475 POU1F1 JASPAR yes 118373533
chr1 154717462 154717474 POU3F1 JASPAR yes 32306449
chr1 154717462 154717474 POU3F1 JASPAR yes 118373534
chr1 154717462 154717475 POU2F2 JASPAR yes 32306450
chr1 154717462 154717475 POU2F2 JASPAR yes 118373535
Genes associated with rs527580101[chr1:154717473], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More