EnhancerDB
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  3. vista50126[chr5:171580373-171580774]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50126[chr5:171580373-171580774]
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Tissue distribution of vista50126
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Transcription factor that possibly regulate vista50126[chr5:171580373-171580774]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 171580378 171580382 YY1 TRANSFAC yes 67768688
chr5 171580378 171580382 YY1 TRANSFAC yes 70760723
chr5 171580400 171580411 CEBPB JASPAR yes 67768689
chr5 171580400 171580411 CEBPB JASPAR yes 70760724
chr5 171580401 171580412 CEBPA JASPAR yes 67768690
chr5 171580401 171580412 CEBPA JASPAR yes 70760725
chr5 171580406 171580422 POU4F2 JASPAR yes 67768691
chr5 171580406 171580422 POU4F2 JASPAR yes 70760726
chr5 171580408 171580412 YY1 TRANSFAC yes 67768692
chr5 171580408 171580412 YY1 TRANSFAC yes 70760727
chr5 171580419 171580433 SPI1 JASPAR yes 67768693
chr5 171580419 171580433 SPI1 JASPAR yes 70760728
chr5 171580432 171580446 GATA2 JASPAR yes 67768694
chr5 171580432 171580446 GATA2 JASPAR yes 70760729
chr5 171580434 171580440 GATA1 TRANSFAC yes 67768695
chr5 171580434 171580440 GATA1 TRANSFAC yes 70760730
chr5 171580434 171580442 GATA5 JASPAR yes 67768696
chr5 171580434 171580442 GATA5 JASPAR yes 70760731
chr5 171580438 171580443 ETS2 TRANSFAC yes 67768697
chr5 171580438 171580443 ETS2 TRANSFAC yes 70760732
chr5 171580455 171580471 RFX2 JASPAR yes 67768698
chr5 171580455 171580471 RFX3 JASPAR yes 67768699
chr5 171580455 171580471 RFX4 JASPAR yes 67768700
chr5 171580455 171580471 RFX2 JASPAR yes 70760733
chr5 171580455 171580471 RFX3 JASPAR yes 70760734
chr5 171580455 171580471 RFX4 JASPAR yes 70760735
chr5 171580481 171580496 JUND JASPAR yes 67768701
chr5 171580481 171580496 JUND JASPAR yes 70760736
chr5 171580482 171580495 JUN JASPAR yes 67768702
chr5 171580482 171580495 JUN JASPAR yes 70760737
chr5 171580504 171580514 MAX JASPAR yes 67768703
chr5 171580504 171580514 MAX JASPAR yes 70760738
chr5 171580506 171580526 RREB1 JASPAR yes 67768704
chr5 171580506 171580526 RREB1 JASPAR yes 70760739
chr5 171580513 171580528 RUNX2 JASPAR yes 67768705
chr5 171580513 171580528 RUNX2 JASPAR yes 70760740
chr5 171580528 171580543 NR2C2 JASPAR yes 67768706
chr5 171580528 171580543 NR2C2 JASPAR yes 70760741
chr5 171580535 171580549 GLIS2 JASPAR yes 67768707
chr5 171580535 171580549 GLIS2 JASPAR yes 70760742
chr5 171580546 171580564 NR3C1 JASPAR yes 67768708
chr5 171580546 171580564 NR3C1 JASPAR yes 70760743
chr5 171580555 171580559 NFE TRANSFAC yes 67768709
chr5 171580555 171580559 NFE TRANSFAC yes 70760744
chr5 171580561 171580565 NFE TRANSFAC yes 67768710
chr5 171580561 171580565 NFE TRANSFAC yes 70760745
chr5 171580563 171580579 RFX3 JASPAR yes 67768711
chr5 171580563 171580579 RFX4 JASPAR yes 67768712
chr5 171580563 171580579 RFX3 JASPAR yes 70760746
chr5 171580563 171580579 RFX4 JASPAR yes 70760747
chr5 171580564 171580583 RFX2 JASPAR yes 67768713
chr5 171580564 171580583 RFX2 JASPAR yes 70760748
chr5 171580596 171580610 TLX1 JASPAR yes 67768714
chr5 171580596 171580610 TLX1 JASPAR yes 70760749
chr5 171580597 171580602 TFAP2A TRANSFAC yes 67768715
chr5 171580597 171580602 TFAP2A TRANSFAC yes 70760750
chr5 171580597 171580603 MZF1 JASPAR yes 67768716
chr5 171580597 171580603 MZF1 JASPAR yes 70760751
chr5 171580599 171580614 AR JASPAR yes 67768717
chr5 171580599 171580614 AR JASPAR yes 70760752
chr5 171580607 171580622 STAT2 JASPAR yes 67768718
chr5 171580607 171580622 STAT2 JASPAR yes 70760753
chr5 171580608 171580622 STAT1 JASPAR yes 67768719
chr5 171580608 171580622 STAT1 JASPAR yes 70760754
chr5 171580645 171580649 H4TF2 TRANSFAC yes 67768720
chr5 171580645 171580649 H4TF2 TRANSFAC yes 70760755
chr5 171580650 171580662 GRHL1 JASPAR yes 67768721
chr5 171580650 171580662 GRHL1 JASPAR yes 70760756
chr5 171580651 171580661 TFCP2 JASPAR yes 67768722
chr5 171580651 171580661 TFCP2 JASPAR yes 70760757
chr5 171580670 171580675 GATA2 JASPAR yes 67768723
chr5 171580670 171580675 GATA2 JASPAR yes 70760758
chr5 171580671 171580677 ZNF354C JASPAR yes 67768724
chr5 171580671 171580677 ZNF354C JASPAR yes 70760759
chr5 171580671 171580681 MAX JASPAR yes 67768725
chr5 171580671 171580681 MAX JASPAR yes 70760760
chr5 171580678 171580685 NFATC2 JASPAR yes 67768726
chr5 171580678 171580685 NFATC2 JASPAR yes 70760761
chr5 171580695 171580710 RUNX2 JASPAR yes 67768727
chr5 171580695 171580710 RUNX2 JASPAR yes 70760762
chr5 171580704 171580709 SP1 TRANSFAC yes 67768728
chr5 171580704 171580709 SP1 TRANSFAC yes 70760763
chr5 171580711 171580726 RFX5 JASPAR yes 67768729
chr5 171580711 171580726 RFX5 JASPAR yes 70760764
chr5 171580717 171580721 ESR1 TRANSFAC yes 67768730
chr5 171580717 171580721 ESR1 TRANSFAC yes 70760765
chr5 171580750 171580755 ETS2 TRANSFAC yes 67768731
chr5 171580750 171580755 ETS2 TRANSFAC yes 70760766
chr5 171580750 171580758 FEV JASPAR yes 67768732
chr5 171580750 171580758 FEV JASPAR yes 70760767
chr5 171580754 171580768 TCF7L2 JASPAR yes 67768733
chr5 171580754 171580768 TCF7L2 JASPAR yes 70760768
chr5 171580754 171580769 LEF1 JASPAR yes 67768734
chr5 171580754 171580769 LEF1 JASPAR yes 70760769
SNP sites on vista50126[chr5:171580373-171580774]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 171580464 rs11343971 TG T
RFX2 RFX3 RFX4
8698824
chr5 171580519 rs10080221 G A
RREB1 RUNX2
8698825
chr5 171580529 rs529554616 T G
NR2C2
8698826
chr5 171580620 rs148814699 C T
STAT1 STAT2
8698827
chr5 171580731 rs116546595 G A,T no 8698828
Genes possibly regulated by vista50126[chr5:171580373-171580774]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 171469077 171615390 - STK10 ENSG00000072786.8 171615390 0.85 1.0 5979 65384
chr5 171621176 171630456 + EFCAB9 ENSG00000214360.4 171621176 0.98 0.94 5980 59598
Expression level of Genes
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miRNAs possibly regulated by vista50126[chr5:171580373-171580774]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results