EnhancerDB
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  3. rs529554616[chr5:171580529]
Enhancers that have rs529554616[chr5:171580529]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr5 171580373 171580774 vista50126
VISTA
Transcript factors that have rs529554616[chr5:171580529]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171580528 171580543 NR2C2 JASPAR yes 67768706
chr5 171580528 171580543 NR2C2 JASPAR yes 70760741
Genes associated with rs529554616[chr5:171580529], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More