EnhancerDB
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  3. rs10080221[chr5:171580519]
Enhancers that have rs10080221[chr5:171580519]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr5 171580373 171580774 vista50126
VISTA
Transcript factors that have rs10080221[chr5:171580519]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171580506 171580526 RREB1 JASPAR yes 67768704
chr5 171580506 171580526 RREB1 JASPAR yes 70760739
chr5 171580513 171580528 RUNX2 JASPAR yes 67768705
chr5 171580513 171580528 RUNX2 JASPAR yes 70760740
Genes associated with rs10080221[chr5:171580519], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More