EnhancerDB
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  3. rs11343971[chr5:171580464]
Enhancers that have rs11343971[chr5:171580464]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr5 171580373 171580774 vista50126
VISTA
Transcript factors that have rs11343971[chr5:171580464]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171580455 171580471 RFX2 JASPAR yes 67768698
chr5 171580455 171580471 RFX3 JASPAR yes 67768699
chr5 171580455 171580471 RFX4 JASPAR yes 67768700
chr5 171580455 171580471 RFX2 JASPAR yes 70760733
chr5 171580455 171580471 RFX3 JASPAR yes 70760734
chr5 171580455 171580471 RFX4 JASPAR yes 70760735
Genes associated with rs11343971[chr5:171580464], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More