EnhancerDB
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  3. vista50182[chr5:172264744-172264958]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50182[chr5:172264744-172264958]
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Tissue distribution of vista50182
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Transcription factor that possibly regulate vista50182[chr5:172264744-172264958]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 172264738 172264886 FOXA1 UCSC Txn Factor no Conserved 108537523
chr5 172264779 172264884 EP300 UCSC Txn Factor no Conserved 108537524
chr5 172264788 172265104 EBF1 UCSC Txn Factor no Conserved 108537525
chr5 172264741 172264756 HNF1A JASPAR yes 67832723
chr5 172264741 172264756 HNF1A JASPAR yes 70763990
chr5 172264742 172264755 HNF1B JASPAR yes 67832724
chr5 172264742 172264755 HNF1B JASPAR yes 70763991
chr5 172264753 172264768 FOXA1 JASPAR yes 67832725
chr5 172264753 172264768 FOXA1 JASPAR yes 70763992
chr5 172264754 172264769 FOXP1 JASPAR yes 67832726
chr5 172264754 172264769 FOXP1 JASPAR yes 70763993
chr5 172264755 172264767 FOXC2 JASPAR yes 67832727
chr5 172264755 172264767 FOXC2 JASPAR yes 70763994
chr5 172264757 172264768 FOXA1 JASPAR yes 67832728
chr5 172264757 172264768 FOXA1 JASPAR yes 70763995
chr5 172264763 172264769 TCF4 TRANSFAC yes 67832729
chr5 172264763 172264769 TCF4 TRANSFAC yes 70763996
chr5 172264769 172264780 HOXC13 JASPAR yes 67832730
chr5 172264769 172264780 HOXC13 JASPAR yes 70763997
chr5 172264778 172264787 SRY JASPAR yes 67832731
chr5 172264778 172264787 SRY JASPAR yes 70763998
chr5 172264785 172264793 HOXA5 JASPAR yes 67832732
chr5 172264785 172264793 HOXA5 JASPAR yes 70763999
chr5 172264787 172264796 VENTX JASPAR yes 67832733
chr5 172264787 172264796 VENTX JASPAR yes 70764000
chr5 172264804 172264809 MYC TRANSFAC yes 67832734
chr5 172264804 172264809 MYC TRANSFAC yes 70764001
chr5 172264818 172264829 USF1 JASPAR yes 67832735
chr5 172264818 172264829 USF1 JASPAR yes 70764002
chr5 172264823 172264837 RORA JASPAR yes 67832736
chr5 172264823 172264837 RORA JASPAR yes 70764003
chr5 172264824 172264834 RORA JASPAR yes 67832737
chr5 172264824 172264834 RORA JASPAR yes 70764004
chr5 172264828 172264841 ELF3 JASPAR yes 67832738
chr5 172264828 172264841 ELF3 JASPAR yes 70764005
chr5 172264829 172264840 SPDEF JASPAR yes 67832739
chr5 172264829 172264840 SPDEF JASPAR yes 70764006
chr5 172264842 172264857 STAT2 JASPAR yes 67832740
chr5 172264842 172264857 STAT2 JASPAR yes 70764007
chr5 172264843 172264857 STAT1 JASPAR yes 67832741
chr5 172264843 172264857 STAT1 JASPAR yes 70764008
chr5 172264850 172264860 ELK1 JASPAR yes 67832742
chr5 172264850 172264860 ELK1 JASPAR yes 70764009
chr5 172264851 172264871 ESR1 JASPAR yes 67832743
chr5 172264851 172264871 ESR1 JASPAR yes 70764010
chr5 172264858 172264873 TFAP2A JASPAR yes 67832744
chr5 172264858 172264873 TFAP2A JASPAR yes 70764011
chr5 172264859 172264873 TLX1 JASPAR yes 67832745
chr5 172264859 172264873 TLX1 JASPAR yes 70764012
chr5 172264860 172264874 TLX1 JASPAR yes 67832746
chr5 172264860 172264874 TLX1 JASPAR yes 70764013
chr5 172264860 172264875 TFAP2A JASPAR yes 67832747
chr5 172264860 172264875 TFAP2C JASPAR yes 67832748
chr5 172264860 172264875 TFAP2A JASPAR yes 70764014
chr5 172264860 172264875 TFAP2C JASPAR yes 70764015
chr5 172264861 172264872 TFAP2A JASPAR yes 67832749
chr5 172264861 172264872 TFAP2A JASPAR yes 70764016
chr5 172264861 172264873 INSM1 JASPAR yes 67832750
chr5 172264861 172264873 INSM1 JASPAR yes 70764017
chr5 172264862 172264871 TFAP2A JASPAR yes 67832751
chr5 172264862 172264871 TFAP2A JASPAR yes 70764018
chr5 172264866 172264871 SP1 TRANSFAC yes 67832752
chr5 172264866 172264871 SP1 TRANSFAC yes 70764019
chr5 172264875 172264885 ID4 JASPAR yes 67832753
chr5 172264875 172264885 NHLH1 JASPAR yes 67832754
chr5 172264875 172264885 TCF3 JASPAR yes 67832755
chr5 172264875 172264885 TCF4 JASPAR yes 67832756
chr5 172264875 172264885 ID4 JASPAR yes 70764020
chr5 172264875 172264885 NHLH1 JASPAR yes 70764021
chr5 172264875 172264885 TCF3 JASPAR yes 70764022
chr5 172264875 172264885 TCF4 JASPAR yes 70764023
chr5 172264876 172264885 SNAI2 JASPAR yes 67832757
chr5 172264876 172264885 SNAI2 JASPAR yes 70764024
chr5 172264877 172264882 USF2 TRANSFAC yes 67832758
chr5 172264877 172264882 USF2 TRANSFAC yes 70764025
chr5 172264903 172264924 ZNF263 JASPAR yes 67832759
chr5 172264903 172264924 ZNF263 JASPAR yes 70764026
chr5 172264906 172264911 SP1 TRANSFAC yes 67832760
chr5 172264906 172264911 SP1 TRANSFAC yes 70764027
chr5 172264909 172264930 ZNF263 JASPAR yes 67832761
chr5 172264909 172264930 ZNF263 JASPAR yes 70764028
chr5 172264913 172264920 CEBPA TRANSFAC yes 67832762
chr5 172264913 172264920 CEBPA TRANSFAC yes 70764029
chr5 172264914 172264925 E2F6 JASPAR yes 67832763
chr5 172264914 172264925 E2F6 JASPAR yes 70764030
chr5 172264918 172264923 ETS2 TRANSFAC yes 67832764
chr5 172264918 172264923 ETS2 TRANSFAC yes 70764031
chr5 172264920 172264934 GATA2 JASPAR yes 67832765
chr5 172264920 172264934 GATA2 JASPAR yes 70764032
chr5 172264922 172264929 GATA3 TRANSFAC yes 67832766
chr5 172264922 172264929 GATA3 TRANSFAC yes 70764033
chr5 172264922 172264930 GATA5 JASPAR yes 67832767
chr5 172264922 172264930 GATA5 JASPAR yes 70764034
chr5 172264925 172264928 MYB TRANSFAC yes 67832768
chr5 172264925 172264928 MYB TRANSFAC yes 70764035
chr5 172264931 172264941 ELK1 JASPAR yes 67832769
chr5 172264931 172264941 ELK1 JASPAR yes 70764036
chr5 172264931 172264943 ELF1 JASPAR yes 67832770
chr5 172264931 172264943 ELF4 JASPAR yes 67832771
chr5 172264931 172264943 ELF1 JASPAR yes 70764037
chr5 172264931 172264943 ELF4 JASPAR yes 70764038
chr5 172264932 172264943 ELF5 JASPAR yes 67832772
chr5 172264932 172264943 ELF5 JASPAR yes 70764039
chr5 172264933 172264942 ELK4 JASPAR yes 67832773
chr5 172264933 172264942 ELK4 JASPAR yes 70764040
chr5 172264933 172264943 ELK1 JASPAR yes 67832774
chr5 172264933 172264943 ERG JASPAR yes 67832775
chr5 172264933 172264943 ETV5 JASPAR yes 67832776
chr5 172264933 172264943 FEV JASPAR yes 67832777
chr5 172264933 172264943 FLI1 JASPAR yes 67832778
chr5 172264933 172264943 ELK1 JASPAR yes 70764041
chr5 172264933 172264943 ERG JASPAR yes 70764042
chr5 172264933 172264943 ETV5 JASPAR yes 70764043
chr5 172264933 172264943 FEV JASPAR yes 70764044
chr5 172264933 172264943 FLI1 JASPAR yes 70764045
chr5 172264933 172264944 ELK4 JASPAR yes 67832779
chr5 172264933 172264944 ELK4 JASPAR yes 70764046
chr5 172264935 172264941 ETS1 JASPAR yes 67832780
chr5 172264935 172264941 SPI1 JASPAR yes 67832781
chr5 172264935 172264941 ETS1 JASPAR yes 70764047
chr5 172264935 172264941 SPI1 JASPAR yes 70764048
chr5 172264942 172264957 RFX5 JASPAR yes 67832782
chr5 172264942 172264957 RFX5 JASPAR yes 70764049
SNP sites on vista50182[chr5:172264744-172264958]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 172264763 rs148858616 G T
FOXA1 FOXC2 FOXP1 TCF4
8705454
chr5 172264836 rs370107651 C CGT
EBF1 ELF3 EP300 FOXA1 RORA SPDEF
8705455
chr5 172264836 rs574923699 C CGT
EBF1 ELF3 EP300 FOXA1 RORA SPDEF
8705456
chr5 172264898 rs577213315 C T
EBF1
8705457
Genes possibly regulated by vista50182[chr5:172264744-172264958]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 172195093 172198198 - DUSP1 ENSG00000120129.5 172198198 0.79 1.0 5985 33454
chr5 172261278 172379688 + ERGIC1 ENSG00000113719.11 172261278 0.61 1.0 5986 96534
Expression level of Genes
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miRNAs possibly regulated by vista50182[chr5:172264744-172264958]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results