EnhancerDB
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  3. rs574923699[chr5:172264836]
Enhancers that have rs574923699[chr5:172264836]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 172264744 172264958 vista50182
VISTA
Transcript factors that have rs574923699[chr5:172264836]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172264738 172264886 FOXA1 UCSC Txn Factor no Conserved 108537523
chr5 172264779 172264884 EP300 UCSC Txn Factor no Conserved 108537524
chr5 172264788 172265104 EBF1 UCSC Txn Factor no Conserved 108537525
chr5 172264823 172264837 RORA JASPAR yes 67832736
chr5 172264823 172264837 RORA JASPAR yes 70764003
chr5 172264828 172264841 ELF3 JASPAR yes 67832738
chr5 172264828 172264841 ELF3 JASPAR yes 70764005
chr5 172264829 172264840 SPDEF JASPAR yes 67832739
chr5 172264829 172264840 SPDEF JASPAR yes 70764006
Genes associated with rs574923699[chr5:172264836], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More