EnhancerDB
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  3. rs148858616[chr5:172264763]
Enhancers that have rs148858616[chr5:172264763]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 172264744 172264958 vista50182
VISTA
Transcript factors that have rs148858616[chr5:172264763]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172264738 172264886 FOXA1 UCSC Txn Factor no Conserved 108537523
chr5 172264753 172264768 FOXA1 JASPAR yes 67832725
chr5 172264753 172264768 FOXA1 JASPAR yes 70763992
chr5 172264754 172264769 FOXP1 JASPAR yes 67832726
chr5 172264754 172264769 FOXP1 JASPAR yes 70763993
chr5 172264755 172264767 FOXC2 JASPAR yes 67832727
chr5 172264755 172264767 FOXC2 JASPAR yes 70763994
chr5 172264757 172264768 FOXA1 JASPAR yes 67832728
chr5 172264757 172264768 FOXA1 JASPAR yes 70763995
chr5 172264763 172264769 TCF4 TRANSFAC yes 67832729
chr5 172264763 172264769 TCF4 TRANSFAC yes 70763996
Genes associated with rs148858616[chr5:172264763], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More