EnhancerDB
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  3. SPDEF[chr5:172264829-172264840]
Chromosome characteristics of SPDEF[chr5:172264829-172264840]
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Enhancers possibly regulated by SPDEF[chr5:172264829-172264840]
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Chrom Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 172264744 172264958 vista50182
VISTA
SNP sites on SPDEF[chr5:172264829-172264840]
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Chrom Position dbSNP ID Reference Allele Alternative Allele id More
chr5 172264836 rs370107651 C CGT 8705455
chr5 172264836 rs574923699 C CGT 8705456
Genes possibly regulated by SPDEF[chr5:172264829-172264840]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance to TFBS id More
Expression level of Genes
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No results
miRNAs possibly regulated by SPDEF[chr5:172264829-172264840]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End strand miRNA Name miRBase ID TSS TSI of Normal tissues TSI of Cancer tissues Distance to TFBS id More
Expression level of miRNAs
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No results