EnhancerDB
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  3. vista52947[chr6:106253342-106253636]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52947[chr6:106253342-106253636]
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Tissue distribution of vista52947
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Transcription factor that possibly regulate vista52947[chr6:106253342-106253636]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 106253393 106253713 JUND UCSC Txn Factor no Conserved 108541134
chr6 106253339 106253354 IRF9 JASPAR yes 70409023
chr6 106253339 106253354 IRF9 JASPAR yes 103983049
chr6 106253352 106253356 YY1 TRANSFAC yes 70409024
chr6 106253352 106253356 YY1 TRANSFAC yes 103983050
chr6 106253361 106253375 TCF7L2 JASPAR yes 70409025
chr6 106253361 106253375 TCF7L2 JASPAR yes 103983051
chr6 106253361 106253376 LEF1 JASPAR yes 70409026
chr6 106253361 106253376 LEF1 JASPAR yes 103983052
chr6 106253365 106253371 TCF1 TRANSFAC yes 70409027
chr6 106253365 106253371 TCF1 TRANSFAC yes 103983053
chr6 106253365 106253372 TCF4 TRANSFAC yes 70409028
chr6 106253365 106253372 TCF4 TRANSFAC yes 103983054
chr6 106253374 106253392 ESR1 JASPAR yes 70409029
chr6 106253374 106253392 ESR1 JASPAR yes 103983055
chr6 106253389 106253400 NFE2 JASPAR yes 70409030
chr6 106253389 106253400 NFE2 JASPAR yes 103983056
chr6 106253390 106253399 JDP2 JASPAR yes 70409031
chr6 106253390 106253399 JDP2 JASPAR yes 103983057
chr6 106253397 106253418 REST JASPAR yes 70409032
chr6 106253397 106253418 REST JASPAR yes 103983058
chr6 106253399 106253403 LFA1 TRANSFAC yes 70409033
chr6 106253399 106253403 LFA1 TRANSFAC yes 103983059
chr6 106253405 106253415 NFATC3 JASPAR yes 70409034
chr6 106253405 106253415 NFATC3 JASPAR yes 103983060
chr6 106253407 106253414 NFATC2 JASPAR yes 70409035
chr6 106253407 106253414 NFATC2 JASPAR yes 103983061
chr6 106253414 106253426 EHF JASPAR yes 70409036
chr6 106253414 106253426 EHF JASPAR yes 103983062
chr6 106253414 106253427 ELF3 JASPAR yes 70409037
chr6 106253414 106253427 ELF3 JASPAR yes 103983063
chr6 106253415 106253426 ELF5 JASPAR yes 70409038
chr6 106253415 106253426 ELF5 JASPAR yes 103983064
chr6 106253417 106253422 ETS2 TRANSFAC yes 70409039
chr6 106253417 106253422 ETS2 TRANSFAC yes 103983065
chr6 106253417 106253425 FEV JASPAR yes 70409040
chr6 106253417 106253425 FEV JASPAR yes 103983066
chr6 106253425 106253439 SPI1 JASPAR yes 70409041
chr6 106253425 106253439 SPI1 JASPAR yes 103983067
chr6 106253425 106253440 STAT2 JASPAR yes 70409042
chr6 106253425 106253440 STAT2 JASPAR yes 103983068
chr6 106253430 106253435 ETS2 TRANSFAC yes 70409043
chr6 106253430 106253435 ETS2 TRANSFAC yes 103983069
chr6 106253432 106253444 GRHL1 JASPAR yes 70409044
chr6 106253432 106253444 GRHL1 JASPAR yes 103983070
chr6 106253433 106253443 TFCP2 JASPAR yes 70409045
chr6 106253433 106253443 TFCP2 JASPAR yes 103983071
chr6 106253444 106253454 MZF1 JASPAR yes 70409046
chr6 106253444 106253454 MZF1 JASPAR yes 103983072
chr6 106253450 106253468 RARA JASPAR yes 70409047
chr6 106253450 106253468 RARA JASPAR yes 103983073
chr6 106253457 106253464 JUN TRANSFAC yes 70409048
chr6 106253457 106253464 JUN TRANSFAC yes 103983074
chr6 106253461 106253471 ALX3 JASPAR yes 70409049
chr6 106253461 106253471 LBX2 JASPAR yes 70409050
chr6 106253461 106253471 MIXL1 JASPAR yes 70409051
chr6 106253461 106253471 ALX3 JASPAR yes 103983075
chr6 106253461 106253471 LBX2 JASPAR yes 103983076
chr6 106253461 106253471 MIXL1 JASPAR yes 103983077
chr6 106253462 106253470 LHX9 JASPAR yes 70409052
chr6 106253462 106253470 SHOX JASPAR yes 70409053
chr6 106253462 106253470 LHX9 JASPAR yes 103983078
chr6 106253462 106253470 SHOX JASPAR yes 103983079
chr6 106253478 106253495 RXRA JASPAR yes 70409054
chr6 106253478 106253495 RXRA JASPAR yes 103983080
chr6 106253486 106253496 SREBF1 JASPAR yes 70409055
chr6 106253486 106253496 SREBF2 JASPAR yes 70409056
chr6 106253486 106253496 SREBF1 JASPAR yes 103983081
chr6 106253486 106253496 SREBF2 JASPAR yes 103983082
chr6 106253496 106253501 ETS2 TRANSFAC yes 70409057
chr6 106253496 106253501 ETS2 TRANSFAC yes 103983083
chr6 106253505 106253520 PRDM1 JASPAR yes 70409058
chr6 106253505 106253520 PRDM1 JASPAR yes 103983084
chr6 106253506 106253524 ESR1 JASPAR yes 70409059
chr6 106253506 106253524 ESR1 JASPAR yes 103983085
chr6 106253525 106253529 LFA1 TRANSFAC yes 70409060
chr6 106253525 106253529 LFA1 TRANSFAC yes 103983086
chr6 106253572 106253583 CDX2 JASPAR yes 70409061
chr6 106253572 106253583 CDX2 JASPAR yes 103983087
chr6 106253573 106253584 HOXA10 JASPAR yes 70409062
chr6 106253573 106253584 HOXA10 JASPAR yes 103983088
chr6 106253574 106253583 CDX1 JASPAR yes 70409063
chr6 106253574 106253583 CDX1 JASPAR yes 103983089
chr6 106253580 106253594 JUN JASPAR yes 70409064
chr6 106253580 106253594 JUN JASPAR yes 103983090
chr6 106253583 106253594 FOSL2 JASPAR yes 70409065
chr6 106253583 106253594 JUNB JASPAR yes 70409066
chr6 106253583 106253594 FOSL2 JASPAR yes 103983091
chr6 106253583 106253594 JUNB JASPAR yes 103983092
chr6 106253584 106253595 FOS JASPAR yes 70409067
chr6 106253584 106253595 FOSL1 JASPAR yes 70409068
chr6 106253584 106253595 JUND JASPAR yes 70409069
chr6 106253584 106253595 NFE2 JASPAR yes 70409070
chr6 106253584 106253595 FOS JASPAR yes 103983093
chr6 106253584 106253595 FOSL1 JASPAR yes 103983094
chr6 106253584 106253595 JUND JASPAR yes 103983095
chr6 106253584 106253595 NFE2 JASPAR yes 103983096
chr6 106253585 106253594 JDP2 JASPAR yes 70409071
chr6 106253585 106253594 JDP2 JASPAR yes 103983097
chr6 106253585 106253596 FOSL2 JASPAR yes 70409072
chr6 106253585 106253596 JUNB JASPAR yes 70409073
chr6 106253585 106253596 FOSL2 JASPAR yes 103983098
chr6 106253585 106253596 JUNB JASPAR yes 103983099
chr6 106253585 106253599 JUN JASPAR yes 70409074
chr6 106253585 106253599 JUN JASPAR yes 103983100
chr6 106253586 106253597 BATF JASPAR yes 70409075
chr6 106253586 106253597 BATF JASPAR yes 103983101
chr6 106253607 106253623 RFX2 JASPAR yes 70409076
chr6 106253607 106253623 RFX3 JASPAR yes 70409077
chr6 106253607 106253623 RFX2 JASPAR yes 103983102
chr6 106253607 106253623 RFX3 JASPAR yes 103983103
chr6 106253623 106253636 NR2F1 JASPAR yes 70409078
chr6 106253623 106253636 NR2F1 JASPAR yes 103983104
chr6 106253627 106253637 RORA JASPAR yes 70409079
chr6 106253627 106253637 RORA JASPAR yes 103983105
chr6 106253627 106253641 NR2F1 JASPAR yes 70409080
chr6 106253627 106253641 RXRB JASPAR yes 70409081
chr6 106253627 106253641 RXRG JASPAR yes 70409082
chr6 106253627 106253641 NR2F1 JASPAR yes 103983106
chr6 106253627 106253641 RXRB JASPAR yes 103983107
chr6 106253627 106253641 RXRG JASPAR yes 103983108
chr6 106253632 106253640 FOXO3 JASPAR yes 70409083
chr6 106253632 106253640 FOXO3 JASPAR yes 103983109
chr6 106253635 106253647 YY1 JASPAR yes 70409084
chr6 106253635 106253647 YY1 JASPAR yes 103983110
SNP sites on vista52947[chr6:106253342-106253636]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 106253342 rs148092429 C T
IRF9
9229578
chr6 106253343 rs560097113 G A
IRF9
9229579
chr6 106253390 rs140446891 CATG C
ESR1 JDP2 NFE2
9229580
chr6 106253399 rs6568408 T G
JDP2 JUND LFA1 NFE2 REST
9229581
chr6 106253442 rs141768777 T C
GRHL1 JUND TFCP2
9229582
chr6 106253466 rs549465108 A G
ALX3 JUND LBX2 LHX9 MIXL1 RARA SHOX
9229583
chr6 106253497 rs74828689 G A
ETS2 JUND
9229584
chr6 106253535 rs1355021 G C
JUND
9229585
chr6 106253571 rs191993220 A C
JUND
9229586
Genes possibly regulated by vista52947[chr6:106253342-106253636]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista52947[chr6:106253342-106253636]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results