EnhancerDB
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  3. rs6568408[chr6:106253399]
Enhancers that have rs6568408[chr6:106253399]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 106226176 106267255 enh23455
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen
chr6 106253342 106253636 vista52947
VISTA
Transcript factors that have rs6568408[chr6:106253399]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 106253389 106253400 NFE2 JASPAR yes 70409030
chr6 106253389 106253400 NFE2 JASPAR yes 103983056
chr6 106253390 106253399 JDP2 JASPAR yes 70409031
chr6 106253390 106253399 JDP2 JASPAR yes 103983057
chr6 106253393 106253713 JUND UCSC Txn Factor no Conserved 108541134
chr6 106253397 106253418 REST JASPAR yes 70409032
chr6 106253397 106253418 REST JASPAR yes 103983058
chr6 106253399 106253403 LFA1 TRANSFAC yes 70409033
chr6 106253399 106253403 LFA1 TRANSFAC yes 103983059
Genes associated with rs6568408[chr6:106253399], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More