EnhancerDB
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  3. rs140446891[chr6:106253390]
Enhancers that have rs140446891[chr6:106253390]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 106226176 106267255 enh23455
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen
chr6 106253342 106253636 vista52947
VISTA
Transcript factors that have rs140446891[chr6:106253390]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 106253374 106253392 ESR1 JASPAR yes 70409029
chr6 106253374 106253392 ESR1 JASPAR yes 103983055
chr6 106253389 106253400 NFE2 JASPAR yes 70409030
chr6 106253389 106253400 NFE2 JASPAR yes 103983056
chr6 106253390 106253399 JDP2 JASPAR yes 70409031
chr6 106253390 106253399 JDP2 JASPAR yes 103983057
Genes associated with rs140446891[chr6:106253390], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More