EnhancerDB
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  3. vista5319[chr1:225654906-225655584]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5319[chr1:225654906-225655584]
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Tissue distribution of vista5319
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Transcription factor that possibly regulate vista5319[chr1:225654906-225655584]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 225654661 225655873 POLR2A UCSC Txn Factor no Conserved 107874238
chr1 225654701 225655241 GABPA UCSC Txn Factor no Conserved 107874239
chr1 225654824 225655140 EBF1 UCSC Txn Factor no Conserved 107874245
chr1 225655370 225655663 RUNX3 UCSC Txn Factor no Conserved 107874331
chr1 225655431 225655614 SPI1 UCSC Txn Factor no Conserved 107874344
chr1 225654903 225654913 POU6F2 JASPAR yes 35744245
chr1 225654903 225654913 POU6F2 JASPAR yes 118469304
chr1 225654904 225654914 EMX1 JASPAR yes 35744246
chr1 225654904 225654914 EVX1 JASPAR yes 35744247
chr1 225654904 225654914 EVX2 JASPAR yes 35744248
chr1 225654904 225654914 HOXA2 JASPAR yes 35744249
chr1 225654904 225654914 HOXB2 JASPAR yes 35744250
chr1 225654904 225654914 HOXB3 JASPAR yes 35744251
chr1 225654904 225654914 NOTO JASPAR yes 35744252
chr1 225654904 225654914 EMX1 JASPAR yes 118469305
chr1 225654904 225654914 EVX1 JASPAR yes 118469306
chr1 225654904 225654914 EVX2 JASPAR yes 118469307
chr1 225654904 225654914 HOXA2 JASPAR yes 118469308
chr1 225654904 225654914 HOXB2 JASPAR yes 118469309
chr1 225654904 225654914 HOXB3 JASPAR yes 118469310
chr1 225654904 225654914 NOTO JASPAR yes 118469311
chr1 225654907 225654911 YY1 TRANSFAC yes 35744253
chr1 225654907 225654911 YY1 TRANSFAC yes 118469312
chr1 225654908 225654928 TBX19 JASPAR yes 35744254
chr1 225654908 225654928 TBX19 JASPAR yes 118469313
chr1 225654915 225654936 ZNF263 JASPAR yes 35744255
chr1 225654915 225654936 ZNF263 JASPAR yes 118469314
chr1 225654920 225654931 NFE2L2 JASPAR yes 35744256
chr1 225654920 225654931 NFE2L2 JASPAR yes 118469315
chr1 225654942 225654955 ELF1 JASPAR yes 35744257
chr1 225654942 225654955 ELF1 JASPAR yes 118469316
chr1 225654945 225654955 GABPA JASPAR yes 35744258
chr1 225654945 225654955 GABPA JASPAR yes 118469317
chr1 225654945 225654956 FLI1 JASPAR yes 35744259
chr1 225654945 225654956 FLI1 JASPAR yes 118469318
chr1 225655010 225655025 RFX5 JASPAR yes 35744260
chr1 225655010 225655025 RFX5 JASPAR yes 118469319
chr1 225655012 225655016 H4TF2 TRANSFAC yes 35744261
chr1 225655012 225655016 H4TF2 TRANSFAC yes 118469320
chr1 225655012 225655026 EBF1 JASPAR yes 35744262
chr1 225655012 225655026 EBF1 JASPAR yes 118469321
chr1 225655018 225655039 ZNF263 JASPAR yes 35744263
chr1 225655018 225655039 ZNF263 JASPAR yes 118469322
chr1 225655035 225655040 SP1 TRANSFAC yes 35744264
chr1 225655035 225655040 SP1 TRANSFAC yes 118469323
chr1 225655047 225655055 MEIS2 JASPAR yes 35744265
chr1 225655047 225655055 MEIS3 JASPAR yes 35744266
chr1 225655047 225655055 MEIS2 JASPAR yes 118469324
chr1 225655047 225655055 MEIS3 JASPAR yes 118469325
chr1 225655048 225655052 NFE TRANSFAC yes 35744267
chr1 225655048 225655052 NFE TRANSFAC yes 118469326
chr1 225655048 225655055 MEIS1 JASPAR yes 35744268
chr1 225655048 225655055 MEIS1 JASPAR yes 118469327
chr1 225655073 225655088 RFX5 JASPAR yes 35744269
chr1 225655073 225655088 RFX5 JASPAR yes 118469328
chr1 225655074 225655079 MYC TRANSFAC yes 35744270
chr1 225655074 225655079 MYC TRANSFAC yes 118469329
chr1 225655077 225655084 MEIS1 JASPAR yes 35744271
chr1 225655077 225655084 MEIS1 JASPAR yes 118469330
chr1 225655077 225655085 MEIS2 JASPAR yes 35744272
chr1 225655077 225655085 MEIS3 JASPAR yes 35744273
chr1 225655077 225655085 MEIS2 JASPAR yes 118469331
chr1 225655077 225655085 MEIS3 JASPAR yes 118469332
chr1 225655083 225655087 LFA1 TRANSFAC yes 35744274
chr1 225655083 225655087 LFA1 TRANSFAC yes 118469333
chr1 225655120 225655130 ZNF740 JASPAR yes 35744275
chr1 225655120 225655130 ZNF740 JASPAR yes 118469334
chr1 225655129 225655143 IRF8 JASPAR yes 35744276
chr1 225655129 225655143 IRF8 JASPAR yes 118469335
chr1 225655130 225655144 STAT1 JASPAR yes 35744277
chr1 225655130 225655144 STAT1 JASPAR yes 118469336
chr1 225655130 225655145 STAT2 JASPAR yes 35744278
chr1 225655130 225655145 STAT2 JASPAR yes 118469337
chr1 225655153 225655165 TFAP2A JASPAR yes 35744279
chr1 225655153 225655165 TFAP2B JASPAR yes 35744280
chr1 225655153 225655165 TFAP2C JASPAR yes 35744281
chr1 225655153 225655165 TFAP2A JASPAR yes 118469338
chr1 225655153 225655165 TFAP2B JASPAR yes 118469339
chr1 225655153 225655165 TFAP2C JASPAR yes 118469340
chr1 225655153 225655168 TFAP2A JASPAR yes 35744282
chr1 225655153 225655168 TFAP2C JASPAR yes 35744283
chr1 225655153 225655168 TFAP2A JASPAR yes 118469341
chr1 225655153 225655168 TFAP2C JASPAR yes 118469342
chr1 225655154 225655165 TFAP2A JASPAR yes 35744284
chr1 225655154 225655165 TFAP2B JASPAR yes 35744285
chr1 225655154 225655165 TFAP2C JASPAR yes 35744286
chr1 225655154 225655165 TFAP2A JASPAR yes 118469343
chr1 225655154 225655165 TFAP2B JASPAR yes 118469344
chr1 225655154 225655165 TFAP2C JASPAR yes 118469345
chr1 225655167 225655177 NHLH1 JASPAR yes 35744287
chr1 225655167 225655177 NHLH1 JASPAR yes 118469346
chr1 225655184 225655188 LFA1 TRANSFAC yes 35744288
chr1 225655184 225655188 LFA1 TRANSFAC yes 118469347
chr1 225655222 225655242 PPARG JASPAR yes 35744289
chr1 225655222 225655242 PPARG JASPAR yes 118469348
chr1 225655227 225655238 NFKB1 JASPAR yes 35744290
chr1 225655227 225655238 NFKB1 JASPAR yes 118469349
chr1 225655234 225655240 SP1 TRANSFAC yes 35744291
chr1 225655234 225655240 SP1 TRANSFAC yes 118469350
chr1 225655243 225655252 NFIX JASPAR yes 35744292
chr1 225655243 225655252 NFIX JASPAR yes 118469351
chr1 225655243 225655253 NFIA JASPAR yes 35744293
chr1 225655243 225655253 NFIA JASPAR yes 118469352
chr1 225655245 225655251 NFIC JASPAR yes 35744294
chr1 225655245 225655251 NFIC JASPAR yes 118469353
chr1 225655251 225655262 EBF1 JASPAR yes 35744295
chr1 225655251 225655262 EBF1 JASPAR yes 118469354
chr1 225655289 225655305 SOX4 JASPAR yes 35744296
chr1 225655289 225655305 SOX4 JASPAR yes 118469355
chr1 225655290 225655305 SOX21 JASPAR yes 35744297
chr1 225655290 225655305 SOX21 JASPAR yes 118469356
chr1 225655304 225655308 NFE TRANSFAC yes 35744298
chr1 225655304 225655308 NFE TRANSFAC yes 118469357
chr1 225655317 225655335 ESR2 JASPAR yes 35744299
chr1 225655317 225655335 ESR2 JASPAR yes 118469358
chr1 225655331 225655345 GATA2 JASPAR yes 35744300
chr1 225655331 225655345 GATA2 JASPAR yes 118469359
chr1 225655333 225655341 GATA3 JASPAR yes 35744301
chr1 225655333 225655341 GATA3 JASPAR yes 118469360
chr1 225655405 225655416 NFKB1 JASPAR yes 35744302
chr1 225655405 225655416 NFKB1 JASPAR yes 118469361
chr1 225655407 225655419 ZBTB7B JASPAR yes 35744303
chr1 225655407 225655419 ZBTB7C JASPAR yes 35744304
chr1 225655407 225655419 ZBTB7B JASPAR yes 118469362
chr1 225655407 225655419 ZBTB7C JASPAR yes 118469363
chr1 225655415 225655429 SPIC JASPAR yes 35744305
chr1 225655415 225655429 SPIC JASPAR yes 118469364
chr1 225655419 225655440 ZNF263 JASPAR yes 35744306
chr1 225655419 225655440 ZNF263 JASPAR yes 118469365
chr1 225655422 225655443 ZNF263 JASPAR yes 35744307
chr1 225655422 225655443 ZNF263 JASPAR yes 118469366
chr1 225655427 225655442 HNF4G JASPAR yes 35744308
chr1 225655427 225655442 NR2C2 JASPAR yes 35744309
chr1 225655427 225655442 HNF4G JASPAR yes 118469367
chr1 225655427 225655442 NR2C2 JASPAR yes 118469368
chr1 225655428 225655443 HNF4A JASPAR yes 35744310
chr1 225655428 225655443 HNF4A JASPAR yes 118469369
chr1 225655437 225655441 LFA1 TRANSFAC yes 35744311
chr1 225655437 225655441 LFA1 TRANSFAC yes 118469370
chr1 225655441 225655454 SMAD2 JASPAR yes 35744312
chr1 225655441 225655454 SMAD2 JASPAR yes 118469371
chr1 225655462 225655470 MGA JASPAR yes 35744313
chr1 225655462 225655470 TBX15 JASPAR yes 35744314
chr1 225655462 225655470 TBX1 JASPAR yes 35744315
chr1 225655462 225655470 TBX4 JASPAR yes 35744316
chr1 225655462 225655470 TBX5 JASPAR yes 35744317
chr1 225655462 225655470 MGA JASPAR yes 118469372
chr1 225655462 225655470 TBX15 JASPAR yes 118469373
chr1 225655462 225655470 TBX1 JASPAR yes 118469374
chr1 225655462 225655470 TBX4 JASPAR yes 118469375
chr1 225655462 225655470 TBX5 JASPAR yes 118469376
chr1 225655466 225655478 NHLH1 JASPAR yes 35744318
chr1 225655466 225655478 NHLH1 JASPAR yes 118469377
chr1 225655467 225655477 NHLH1 JASPAR yes 35744319
chr1 225655467 225655477 NHLH1 JASPAR yes 118469378
chr1 225655478 225655490 INSM1 JASPAR yes 35744320
chr1 225655478 225655490 INSM1 JASPAR yes 118469379
chr1 225655490 225655495 SP1 TRANSFAC yes 35744321
chr1 225655490 225655495 SP1 TRANSFAC yes 118469380
chr1 225655498 225655513 RFX5 JASPAR yes 35744322
chr1 225655498 225655513 RFX5 JASPAR yes 118469381
chr1 225655506 225655523 RARA JASPAR yes 35744323
chr1 225655506 225655523 RARA JASPAR yes 118469382
chr1 225655510 225655524 RORA JASPAR yes 35744324
chr1 225655510 225655524 RORA JASPAR yes 118469383
chr1 225655513 225655523 RORA JASPAR yes 35744325
chr1 225655513 225655523 RORA JASPAR yes 118469384
chr1 225655515 225655523 CREB1 JASPAR yes 35744326
chr1 225655515 225655523 CREB1 JASPAR yes 118469385
chr1 225655516 225655524 NR4A2 JASPAR yes 35744327
chr1 225655516 225655524 NR4A2 JASPAR yes 118469386
chr1 225655518 225655522 ESR1 TRANSFAC yes 35744328
chr1 225655518 225655522 ESR1 TRANSFAC yes 118469387
chr1 225655518 225655539 IRF1 JASPAR yes 35744329
chr1 225655518 225655539 IRF1 JASPAR yes 118469388
chr1 225655520 225655531 ELK4 JASPAR yes 35744330
chr1 225655520 225655531 FLI1 JASPAR yes 35744331
chr1 225655520 225655531 ELK4 JASPAR yes 118469389
chr1 225655520 225655531 FLI1 JASPAR yes 118469390
chr1 225655521 225655531 ELK1 JASPAR yes 35744332
chr1 225655521 225655531 ELK3 JASPAR yes 35744333
chr1 225655521 225655531 ERF JASPAR yes 35744334
chr1 225655521 225655531 ERG JASPAR yes 35744335
chr1 225655521 225655531 ETS1 JASPAR yes 35744336
chr1 225655521 225655531 ETV1 JASPAR yes 35744337
chr1 225655521 225655531 ETV3 JASPAR yes 35744338
chr1 225655521 225655531 ETV4 JASPAR yes 35744339
chr1 225655521 225655531 ETV6 JASPAR yes 35744340
chr1 225655521 225655531 FEV JASPAR yes 35744341
chr1 225655521 225655531 FLI1 JASPAR yes 35744342
chr1 225655521 225655531 GABPA JASPAR yes 35744343
chr1 225655521 225655531 ELK1 JASPAR yes 118469391
chr1 225655521 225655531 ELK3 JASPAR yes 118469392
chr1 225655521 225655531 ERF JASPAR yes 118469393
chr1 225655521 225655531 ERG JASPAR yes 118469394
chr1 225655521 225655531 ETS1 JASPAR yes 118469395
chr1 225655521 225655531 ETV1 JASPAR yes 118469396
chr1 225655521 225655531 ETV3 JASPAR yes 118469397
chr1 225655521 225655531 ETV4 JASPAR yes 118469398
chr1 225655521 225655531 ETV6 JASPAR yes 118469399
chr1 225655521 225655531 FEV JASPAR yes 118469400
chr1 225655521 225655531 FLI1 JASPAR yes 118469401
chr1 225655521 225655531 GABPA JASPAR yes 118469402
chr1 225655521 225655532 ETV2 JASPAR yes 35744344
chr1 225655521 225655532 ETV2 JASPAR yes 118469403
chr1 225655521 225655533 ELF1 JASPAR yes 35744345
chr1 225655521 225655533 ELF4 JASPAR yes 35744346
chr1 225655521 225655533 ELF1 JASPAR yes 118469404
chr1 225655521 225655533 ELF4 JASPAR yes 118469405
chr1 225655521 225655534 ELF1 JASPAR yes 35744347
chr1 225655521 225655534 ELF1 JASPAR yes 118469406
chr1 225655522 225655529 SPI1 JASPAR yes 35744348
chr1 225655522 225655529 SPI1 JASPAR yes 118469407
chr1 225655522 225655530 EHF JASPAR yes 35744349
chr1 225655522 225655530 FEV JASPAR yes 35744350
chr1 225655522 225655530 EHF JASPAR yes 118469408
chr1 225655522 225655530 FEV JASPAR yes 118469409
chr1 225655522 225655543 ZNF263 JASPAR yes 35744351
chr1 225655522 225655543 ZNF263 JASPAR yes 118469410
chr1 225655527 225655531 NFE TRANSFAC yes 35744352
chr1 225655527 225655531 NFE TRANSFAC yes 118469411
chr1 225655527 225655541 STAT1 JASPAR yes 35744353
chr1 225655527 225655541 STAT1 JASPAR yes 118469412
chr1 225655534 225655545 E2F6 JASPAR yes 35744354
chr1 225655534 225655545 E2F6 JASPAR yes 118469413
chr1 225655566 225655586 RREB1 JASPAR yes 35744355
chr1 225655566 225655586 RREB1 JASPAR yes 118469414
chr1 225655570 225655580 SP1 JASPAR yes 35744356
chr1 225655570 225655580 SP1 JASPAR yes 118469415
chr1 225655571 225655581 SP1 JASPAR yes 35744357
chr1 225655571 225655581 SP1 JASPAR yes 118469416
chr1 225655574 225655579 SP1 TRANSFAC yes 35744358
chr1 225655574 225655579 SP1 TRANSFAC yes 118469417
chr1 225655578 225655593 TFAP2C JASPAR yes 35744359
chr1 225655578 225655593 TFAP2C JASPAR yes 118469418
SNP sites on vista5319[chr1:225654906-225655584]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 225654917 rs555469641 G A
EBF1 GABPA POLR2A TBX19 ZNF263
985417
chr1 225655037 rs116129812 G A
EBF1 GABPA POLR2A SP1 ZNF263
985418
chr1 225655077 rs112117490 G T
EBF1 GABPA MEIS1 MEIS2 MEIS3 MYC POLR2A RFX5
985419
chr1 225655094 rs79422522 A G
EBF1 GABPA POLR2A
985420
chr1 225655148 rs114661209 G T
GABPA POLR2A
985421
chr1 225655151 rs76374387 G A
GABPA POLR2A
985422
chr1 225655234 rs534197923 TC T
GABPA NFKB1 POLR2A PPARG SP1
985423
chr1 225655237 rs114289988 C T
GABPA NFKB1 POLR2A PPARG SP1
985424
chr1 225655271 rs539739682 C G
POLR2A
985425
chr1 225655332 rs187219630 C A,T
ESR2 GATA2 POLR2A
985426
chr1 225655405 rs368033662 G A
NFKB1 POLR2A RUNX3
985427
chr1 225655406 rs555528648 C T
NFKB1 POLR2A RUNX3
985428
chr1 225655534 rs140884011 C T
E2F6 ELF1 IRF1 POLR2A RUNX3 SPI1 STAT1 ZNF263
985429
Genes possibly regulated by vista5319[chr1:225654906-225655584]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 225589204 225616627 - LBR ENSG00000143815.10 225616627 0.81 0.99 1885 61721
chr1 225600404 225602040 + AC092811.1 ENSG00000203691.2 225600404 0.81 1.0 1886 45498
Expression level of Genes
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miRNAs possibly regulated by vista5319[chr1:225654906-225655584]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results