EnhancerDB
  1. Home
  2. SNP
  3. rs555469641[chr1:225654917]
Enhancers that have rs555469641[chr1:225654917]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 225654906 225655584 vista5319
VISTA
Transcript factors that have rs555469641[chr1:225654917]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225650829 225656613 ZBTB33 GTRD no Lung (A549) 107874230
chr1 225651124 225656651 ZBTB33 GTRD no Lung (A549) 107874231
chr1 225651156 225656546 ZBTB33 GTRD no Lung (A549) 107874232
chr1 225651415 225654922 ZBTB33 GTRD no Lung (A549) 107874234
chr1 225651543 225654917 ZBTB33 GTRD no Lung (A549) 107874235
chr1 225654615 225656601 AR GTRD no Prostate (PC-3) 21384977
chr1 225654615 225656601 AR GTRD no Prostate (PC-3) 107874236
chr1 225654661 225655177 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874237
chr1 225654661 225655873 POLR2A UCSC Txn Factor no Conserved 107874238
chr1 225654701 225655241 GABPA UCSC Txn Factor no Conserved 107874239
chr1 225654701 225655241 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107874240
chr1 225654727 225655107 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874241
chr1 225654734 225655074 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874242
chr1 225654764 225655204 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21384978
chr1 225654764 225655204 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107874243
chr1 225654802 225655118 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21384979
chr1 225654802 225655118 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107874244
chr1 225654824 225655140 EBF1 UCSC Txn Factor no Conserved 107874245
chr1 225654832 225655131 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874246
chr1 225654835 225655165 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874247
chr1 225654835 225655199 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874248
chr1 225654839 225655159 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874249
chr1 225654839 225656525 ZNF274 GTRD no Cervix (HeLa-S3) 21384980
chr1 225654839 225656525 ZNF274 GTRD no Cervix (HeLa-S3) 107874250
chr1 225654841 225655105 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384981
chr1 225654841 225655105 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107874251
chr1 225654846 225655082 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874252
chr1 225654851 225655115 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874253
chr1 225654856 225655113 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21384982
chr1 225654856 225655113 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107874254
chr1 225654871 225655095 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874255
chr1 225654879 225655081 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874256
chr1 225654893 225655133 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874257
chr1 225654897 225655109 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874258
chr1 225654899 225656614 ZBTB33 GTRD no Lung (A549) 107874259
chr1 225654904 225655124 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874260
chr1 225654907 225656334 ZNF274 GTRD no Cervix (HeLa-S3) 21384983
chr1 225654907 225656334 ZNF274 GTRD no Cervix (HeLa-S3) 107874261
chr1 225654908 225654928 TBX19 JASPAR yes 35744254
chr1 225654908 225654928 TBX19 JASPAR yes 118469313
chr1 225654915 225654936 ZNF263 JASPAR yes 35744255
chr1 225654915 225654936 ZNF263 JASPAR yes 118469314
chr1 225654916 225656609 ZBTB33 GTRD no Lung (A549) 107874262
Genes associated with rs555469641[chr1:225654917], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More