EnhancerDB
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  3. rs112117490[chr1:225655077]
Enhancers that have rs112117490[chr1:225655077]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 225654906 225655584 vista5319
VISTA
Transcript factors that have rs112117490[chr1:225655077]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225650829 225656613 ZBTB33 GTRD no Lung (A549) 107874230
chr1 225651124 225656651 ZBTB33 GTRD no Lung (A549) 107874231
chr1 225651156 225656546 ZBTB33 GTRD no Lung (A549) 107874232
chr1 225654615 225656601 AR GTRD no Prostate (PC-3) 21384977
chr1 225654615 225656601 AR GTRD no Prostate (PC-3) 107874236
chr1 225654661 225655177 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874237
chr1 225654661 225655873 POLR2A UCSC Txn Factor no Conserved 107874238
chr1 225654701 225655241 GABPA UCSC Txn Factor no Conserved 107874239
chr1 225654701 225655241 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107874240
chr1 225654727 225655107 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874241
chr1 225654764 225655204 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21384978
chr1 225654764 225655204 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107874243
chr1 225654802 225655118 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21384979
chr1 225654802 225655118 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107874244
chr1 225654824 225655140 EBF1 UCSC Txn Factor no Conserved 107874245
chr1 225654832 225655131 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874246
chr1 225654835 225655165 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874247
chr1 225654835 225655199 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874248
chr1 225654839 225655159 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874249
chr1 225654839 225656525 ZNF274 GTRD no Cervix (HeLa-S3) 21384980
chr1 225654839 225656525 ZNF274 GTRD no Cervix (HeLa-S3) 107874250
chr1 225654841 225655105 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384981
chr1 225654841 225655105 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107874251
chr1 225654846 225655082 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874252
chr1 225654851 225655115 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874253
chr1 225654856 225655113 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21384982
chr1 225654856 225655113 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107874254
chr1 225654871 225655095 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874255
chr1 225654879 225655081 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874256
chr1 225654893 225655133 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874257
chr1 225654897 225655109 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874258
chr1 225654899 225656614 ZBTB33 GTRD no Lung (A549) 107874259
chr1 225654904 225655124 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107874260
chr1 225654907 225656334 ZNF274 GTRD no Cervix (HeLa-S3) 21384983
chr1 225654907 225656334 ZNF274 GTRD no Cervix (HeLa-S3) 107874261
chr1 225654916 225656609 ZBTB33 GTRD no Lung (A549) 107874262
chr1 225654932 225656144 ZBTB33 GTRD no Brain (SK-N-SH) 21384984
chr1 225654932 225656144 ZBTB33 GTRD no Brain (SK-N-SH) 107874263
chr1 225654934 225656768 TEF1 GTRD no Bone (Osteoblast) 21384985
chr1 225654934 225656768 TEF1 GTRD no Bone (Osteoblast) 107874265
chr1 225654937 225656507 ZBTB33 GTRD no Lung (A549) 107874266
chr1 225654942 225656436 ZBTB33 GTRD no Brain (SK-N-SH) 21384986
chr1 225654942 225656436 ZBTB33 GTRD no Brain (SK-N-SH) 107874267
chr1 225654943 225656383 ZBTB33 GTRD no Lung (A549) 107874268
chr1 225654944 225656455 ZBTB33 GTRD no Brain (SK-N-SH) 21384987
chr1 225654944 225656455 ZBTB33 GTRD no Brain (SK-N-SH) 107874269
chr1 225654947 225656543 ZBTB33 GTRD no Lung (A549) 107874270
chr1 225654947 225656595 ZBTB33 GTRD no Lung (A549) 107874271
chr1 225654958 225656370 ZNF274 GTRD no Cervix (HeLa-S3) 21384988
chr1 225654958 225656370 ZNF274 GTRD no Cervix (HeLa-S3) 107874272
chr1 225654960 225656355 ZBTB33 GTRD no Lung (A549) 107874273
chr1 225654963 225656300 ZBTB33 GTRD no Brain (SK-N-SH) 21384989
chr1 225654963 225656300 ZBTB33 GTRD no Brain (SK-N-SH) 107874274
chr1 225654964 225656200 ZNF274 GTRD no Cervix (HeLa-S3) 21384990
chr1 225654964 225656200 ZNF274 GTRD no Cervix (HeLa-S3) 107874275
chr1 225654968 225656542 ZBTB33 GTRD no Lung (A549) 107874276
chr1 225654971 225656403 ZNF274 GTRD no Cervix (HeLa-S3) 21384991
chr1 225654971 225656403 ZNF274 GTRD no Cervix (HeLa-S3) 107874277
chr1 225654979 225656471 ZNF274 GTRD no Cervix (HeLa-S3) 21384992
chr1 225654979 225656471 ZNF274 GTRD no Cervix (HeLa-S3) 107874278
chr1 225654982 225656530 ZNF274 GTRD no Cervix (HeLa-S3) 21384993
chr1 225654982 225656530 ZNF274 GTRD no Cervix (HeLa-S3) 107874279
chr1 225655004 225656253 ZBTB33 GTRD no Brain (SK-N-SH) 21384994
chr1 225655004 225656253 ZBTB33 GTRD no Brain (SK-N-SH) 107874280
chr1 225655006 225656533 ZBTB33 GTRD no Lung (A549) 107874281
chr1 225655017 225656186 ZBTB33 GTRD no Lung (A549) 107874282
chr1 225655020 225656332 ZBTB33 GTRD no Lung (A549) 107874283
chr1 225655046 225656546 ZBTB33 GTRD no Brain (SK-N-SH) 21384995
chr1 225655046 225656546 ZBTB33 GTRD no Brain (SK-N-SH) 107874284
chr1 225655054 225656197 ZNF274 GTRD no Cervix (HeLa-S3) 21384996
chr1 225655054 225656197 ZNF274 GTRD no Cervix (HeLa-S3) 107874285
chr1 225655062 225656509 ZBTB33 GTRD no Lung (A549) 107874286
chr1 225655071 225656451 ZBTB33 GTRD no Brain (SK-N-SH) 21384997
chr1 225655071 225656451 ZBTB33 GTRD no Brain (SK-N-SH) 107874287
chr1 225655073 225655088 RFX5 JASPAR yes 35744269
chr1 225655073 225655088 RFX5 JASPAR yes 118469328
chr1 225655074 225655079 MYC TRANSFAC yes 35744270
chr1 225655074 225655079 MYC TRANSFAC yes 118469329
chr1 225655074 225656144 ZBTB33 GTRD no Brain (SK-N-SH) 21384998
chr1 225655074 225656144 ZBTB33 GTRD no Brain (SK-N-SH) 107874288
chr1 225655076 225656199 ZBTB33 GTRD no Lung (A549) 107874289
chr1 225655077 225655084 MEIS1 JASPAR yes 35744271
chr1 225655077 225655084 MEIS1 JASPAR yes 118469330
chr1 225655077 225655085 MEIS2 JASPAR yes 35744272
chr1 225655077 225655085 MEIS3 JASPAR yes 35744273
chr1 225655077 225655085 MEIS2 JASPAR yes 118469331
chr1 225655077 225655085 MEIS3 JASPAR yes 118469332
Genes associated with rs112117490[chr1:225655077], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More