EnhancerDB
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  3. vista5496[chr1:230289705-230290142]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5496[chr1:230289705-230290142]
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Tissue distribution of vista5496
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Transcription factor that possibly regulate vista5496[chr1:230289705-230290142]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 230289690 230290014 CEBPB UCSC Txn Factor no Conserved 107878794
chr1 230289710 230289714 NFE TRANSFAC yes 36027403
chr1 230289710 230289714 NFE TRANSFAC yes 118477861
chr1 230289726 230289742 SRF JASPAR yes 36027404
chr1 230289726 230289742 SRF JASPAR yes 118477862
chr1 230289726 230289744 SRF JASPAR yes 36027405
chr1 230289726 230289744 SRF JASPAR yes 118477863
chr1 230289727 230289739 SRF JASPAR yes 36027406
chr1 230289727 230289739 SRF JASPAR yes 118477864
chr1 230289732 230289736 TEAD2 TRANSFAC yes 36027407
chr1 230289732 230289736 TEAD2 TRANSFAC yes 118477865
chr1 230289732 230289737 TBP TRANSFAC yes 36027408
chr1 230289732 230289737 TBP TRANSFAC yes 118477866
chr1 230289743 230289749 HiNF-A TRANSFAC yes 36027409
chr1 230289743 230289749 HiNF-A TRANSFAC yes 118477867
chr1 230289744 230289762 IRF2 JASPAR yes 36027410
chr1 230289744 230289762 IRF2 JASPAR yes 118477868
chr1 230289745 230289766 IRF1 JASPAR yes 36027411
chr1 230289745 230289766 IRF1 JASPAR yes 118477869
chr1 230289747 230289762 STAT2 JASPAR yes 36027412
chr1 230289747 230289762 STAT2 JASPAR yes 118477870
chr1 230289748 230289762 STAT1 JASPAR yes 36027413
chr1 230289748 230289762 STAT1 JASPAR yes 118477871
chr1 230289749 230289764 IRF9 JASPAR yes 36027414
chr1 230289749 230289764 IRF9 JASPAR yes 118477872
chr1 230289764 230289773 SOX9 JASPAR yes 36027415
chr1 230289764 230289773 SOX9 JASPAR yes 118477873
chr1 230289789 230289793 NFE TRANSFAC yes 36027416
chr1 230289789 230289793 NFE TRANSFAC yes 118477874
chr1 230289807 230289812 SP1 TRANSFAC yes 36027417
chr1 230289807 230289812 SP1 TRANSFAC yes 118477875
chr1 230289832 230289843 CEBPB JASPAR yes 36027418
chr1 230289832 230289843 CEBPB JASPAR yes 118477876
chr1 230289832 230289844 HLF JASPAR yes 36027419
chr1 230289832 230289844 HLF JASPAR yes 118477877
chr1 230289833 230289844 CEBPA JASPAR yes 36027420
chr1 230289833 230289844 CEBPA JASPAR yes 118477878
chr1 230289879 230289888 SOX9 JASPAR yes 36027421
chr1 230289879 230289888 SOX9 JASPAR yes 118477879
chr1 230289880 230289891 CEBPA JASPAR yes 36027422
chr1 230289880 230289891 CEBPA JASPAR yes 118477880
chr1 230289880 230289892 HLF JASPAR yes 36027423
chr1 230289880 230289892 HLF JASPAR yes 118477881
chr1 230289881 230289891 CEBPB JASPAR yes 36027424
chr1 230289881 230289891 CEBPD JASPAR yes 36027425
chr1 230289881 230289891 CEBPE JASPAR yes 36027426
chr1 230289881 230289891 CEBPG JASPAR yes 36027427
chr1 230289881 230289891 CEBPB JASPAR yes 118477882
chr1 230289881 230289891 CEBPD JASPAR yes 118477883
chr1 230289881 230289891 CEBPE JASPAR yes 118477884
chr1 230289881 230289891 CEBPG JASPAR yes 118477885
chr1 230289881 230289892 CEBPB JASPAR yes 36027428
chr1 230289881 230289892 CEBPB JASPAR yes 118477886
chr1 230289896 230289907 FOXH1 JASPAR yes 36027429
chr1 230289896 230289907 FOXH1 JASPAR yes 118477887
chr1 230289897 230289903 ZNF354C JASPAR yes 36027430
chr1 230289897 230289903 ZNF354C JASPAR yes 118477888
chr1 230289909 230289913 YY1 TRANSFAC yes 36027431
chr1 230289909 230289913 YY1 TRANSFAC yes 118477889
chr1 230289914 230289926 HNF1B JASPAR yes 36027432
chr1 230289914 230289926 HNF1B JASPAR yes 118477890
chr1 230289918 230289922 YY1 TRANSFAC yes 36027433
chr1 230289918 230289922 YY1 TRANSFAC yes 118477891
chr1 230289918 230289929 CEBPB JASPAR yes 36027434
chr1 230289918 230289929 CEBPB JASPAR yes 118477892
chr1 230289919 230289930 CEBPA JASPAR yes 36027435
chr1 230289919 230289930 CEBPA JASPAR yes 118477893
chr1 230289936 230289948 PKNOX2 JASPAR yes 36027436
chr1 230289936 230289948 TGIF1 JASPAR yes 36027437
chr1 230289936 230289948 TGIF2 JASPAR yes 36027438
chr1 230289936 230289948 PKNOX2 JASPAR yes 118477894
chr1 230289936 230289948 TGIF1 JASPAR yes 118477895
chr1 230289936 230289948 TGIF2 JASPAR yes 118477896
chr1 230289999 230290005 ZNF354C JASPAR yes 36027439
chr1 230289999 230290005 ZNF354C JASPAR yes 118477897
chr1 230290001 230290006 GATA2 JASPAR yes 36027440
chr1 230290001 230290006 GATA2 JASPAR yes 118477898
chr1 230290014 230290024 MAX JASPAR yes 36027441
chr1 230290014 230290024 MAX JASPAR yes 118477899
chr1 230290014 230290028 PLAG1 JASPAR yes 36027442
chr1 230290014 230290028 PLAG1 JASPAR yes 118477900
chr1 230290015 230290022 USF1 JASPAR yes 36027443
chr1 230290015 230290022 USF1 JASPAR yes 118477901
chr1 230290015 230290025 MAX JASPAR yes 36027444
chr1 230290015 230290025 MAX JASPAR yes 118477902
chr1 230290016 230290021 MYC TRANSFAC yes 36027445
chr1 230290016 230290021 USF1 TRANSFAC yes 36027446
chr1 230290016 230290021 USF2 TRANSFAC yes 36027447
chr1 230290016 230290021 MYC TRANSFAC yes 118477903
chr1 230290016 230290021 USF1 TRANSFAC yes 118477904
chr1 230290016 230290021 USF2 TRANSFAC yes 118477905
chr1 230290016 230290023 USF1 JASPAR yes 36027448
chr1 230290016 230290023 USF1 JASPAR yes 118477906
chr1 230290025 230290035 TEAD1 JASPAR yes 36027449
chr1 230290025 230290035 TEAD1 JASPAR yes 118477907
chr1 230290025 230290037 TEAD1 JASPAR yes 36027450
chr1 230290025 230290037 TEAD1 JASPAR yes 118477908
chr1 230290031 230290042 STAT1 JASPAR yes 36027451
chr1 230290031 230290042 STAT1 JASPAR yes 118477909
chr1 230290036 230290051 STAT2 JASPAR yes 36027452
chr1 230290036 230290051 STAT2 JASPAR yes 118477910
chr1 230290077 230290087 RELA JASPAR yes 36027453
chr1 230290077 230290087 RELA JASPAR yes 118477911
chr1 230290078 230290089 NFKB1 JASPAR yes 36027454
chr1 230290078 230290089 NFKB1 JASPAR yes 118477912
chr1 230290112 230290127 MEF2A JASPAR yes 36027455
chr1 230290112 230290127 MEF2A JASPAR yes 118477913
chr1 230290113 230290128 MEF2C JASPAR yes 36027456
chr1 230290113 230290128 MEF2C JASPAR yes 118477914
chr1 230290116 230290120 YY1 TRANSFAC yes 36027457
chr1 230290116 230290120 YY1 TRANSFAC yes 118477915
chr1 230290135 230290142 JUN TRANSFAC yes 36027458
chr1 230290135 230290142 JUN TRANSFAC yes 118477916
chr1 230290141 230290153 TEAD1 JASPAR yes 36027459
chr1 230290141 230290153 TEAD1 JASPAR yes 118477917
SNP sites on vista5496[chr1:230289705-230290142]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 230289838 rs114928166 C G
CEBPA CEBPB HLF
1015455
chr1 230289841 rs535558042 A G
CEBPA CEBPB HLF
1015456
chr1 230289846 rs145137210 GTGTC G
CEBPB
1015457
chr1 230289919 rs577949413 T C
CEBPA CEBPB HNF1B YY1
1015458
chr1 230289956 rs555352359 G A
CEBPB
1015459
chr1 230290037 rs573659280 T C
STAT1 STAT2 TEAD1
1015460
chr1 230290052 rs543112234 G A no 1015461
chr1 230290065 rs368170074 A G no 1015462
chr1 230290069 rs7547269 C T no 1015463
chr1 230290118 rs7551742 A G
MEF2A MEF2C YY1
1015464
Genes possibly regulated by vista5496[chr1:230289705-230290142]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 230193536 230417870 + GALNT2 ENSG00000143641.8 230193536 0.77 0.99 1937 3831
Expression level of Genes
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miRNAs possibly regulated by vista5496[chr1:230289705-230290142]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results