EnhancerDB
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  3. rs543112234[chr1:230290052]
Enhancers that have rs543112234[chr1:230290052]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230237385 230313644 enh12770
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 230289705 230290142 vista5496
VISTA
Transcript factors that have rs543112234[chr1:230290052]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230289666 230290106 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21391561
chr1 230289666 230290106 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107878792
chr1 230289674 230290064 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21391562
chr1 230289674 230290064 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107878793
chr1 230289757 230290073 ZNF274 GTRD no Liver (HepG2) 21391570
chr1 230289757 230290073 ZNF274 GTRD no Liver (HepG2) 107878802
chr1 230289788 230290219 ZNF274 GTRD no Liver (HepG2) 21391571
chr1 230289788 230290219 ZNF274 GTRD no Liver (HepG2) 107878803
chr1 230289847 230290074 ZNF274 GTRD no Cervix (HeLa-S3) 21391575
chr1 230289847 230290074 ZNF274 GTRD no Cervix (HeLa-S3) 107878807
chr1 230289858 230290110 ZNF274 GTRD no Liver (HepG2) 21391576
chr1 230289858 230290110 ZNF274 GTRD no Liver (HepG2) 107878808
chr1 230289861 230290232 ZNF274 GTRD no Liver (HepG2) 21391578
chr1 230289861 230290232 ZNF274 GTRD no Liver (HepG2) 107878810
Genes associated with rs543112234[chr1:230290052], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More