EnhancerDB
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  3. rs7551742[chr1:230290118]
Enhancers that have rs7551742[chr1:230290118]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230237385 230313644 enh12770
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 230289705 230290142 vista5496
VISTA
Transcript factors that have rs7551742[chr1:230290118]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230289788 230290219 ZNF274 GTRD no Liver (HepG2) 21391571
chr1 230289788 230290219 ZNF274 GTRD no Liver (HepG2) 107878803
chr1 230289861 230290232 ZNF274 GTRD no Liver (HepG2) 21391578
chr1 230289861 230290232 ZNF274 GTRD no Liver (HepG2) 107878810
chr1 230290112 230290127 MEF2A JASPAR yes 36027455
chr1 230290112 230290127 MEF2A JASPAR yes 118477913
chr1 230290113 230290128 MEF2C JASPAR yes 36027456
chr1 230290113 230290128 MEF2C JASPAR yes 118477914
chr1 230290116 230290120 YY1 TRANSFAC yes 36027457
chr1 230290116 230290120 YY1 TRANSFAC yes 118477915
Genes associated with rs7551742[chr1:230290118], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More