EnhancerDB
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  3. rs535558042[chr1:230289841]
Enhancers that have rs535558042[chr1:230289841]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230237385 230313644 enh12770
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 230289705 230290142 vista5496
VISTA
Transcript factors that have rs535558042[chr1:230289841]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230288643 230289893 TCF7L2 GTRD no Colon (HCT116) 21391559
chr1 230288643 230289893 TCF7L2 GTRD no Colon (HCT116) 107878790
chr1 230289666 230290106 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21391561
chr1 230289666 230290106 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107878792
chr1 230289674 230290064 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21391562
chr1 230289674 230290064 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107878793
chr1 230289690 230290014 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21391563
chr1 230289690 230290014 CEBPB UCSC Txn Factor no Conserved 107878794
chr1 230289690 230290014 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107878795
chr1 230289698 230290034 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21391564
chr1 230289698 230290034 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107878796
chr1 230289705 230290005 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21391565
chr1 230289705 230290005 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107878797
chr1 230289718 230289994 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21391566
chr1 230289718 230289994 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107878798
chr1 230289720 230290010 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21391567
chr1 230289720 230290010 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107878799
chr1 230289747 230290007 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21391568
chr1 230289747 230290007 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107878800
chr1 230289749 230290005 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21391569
chr1 230289749 230290005 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107878801
chr1 230289757 230290073 ZNF274 GTRD no Liver (HepG2) 21391570
chr1 230289757 230290073 ZNF274 GTRD no Liver (HepG2) 107878802
chr1 230289788 230290219 ZNF274 GTRD no Liver (HepG2) 21391571
chr1 230289788 230290219 ZNF274 GTRD no Liver (HepG2) 107878803
chr1 230289799 230289957 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21391572
chr1 230289799 230289957 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107878804
chr1 230289825 230289967 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21391573
chr1 230289825 230289967 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107878805
chr1 230289829 230289929 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21391574
chr1 230289829 230289929 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107878806
chr1 230289832 230289843 CEBPB JASPAR yes 36027418
chr1 230289832 230289843 CEBPB JASPAR yes 118477876
chr1 230289832 230289844 HLF JASPAR yes 36027419
chr1 230289832 230289844 HLF JASPAR yes 118477877
chr1 230289833 230289844 CEBPA JASPAR yes 36027420
chr1 230289833 230289844 CEBPA JASPAR yes 118477878
Genes associated with rs535558042[chr1:230289841], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More