EnhancerDB
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  3. vista597[chr1:19276270-19276542]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista597[chr1:19276270-19276542]
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Tissue distribution of vista597
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Transcription factor that possibly regulate vista597[chr1:19276270-19276542]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 19276317 19276322 MYC TRANSFAC yes 27165146
chr1 19276317 19276322 USF1 TRANSFAC yes 27165147
chr1 19276317 19276322 USF2 TRANSFAC yes 27165148
chr1 19276317 19276322 MYC TRANSFAC yes 118242663
chr1 19276317 19276322 USF1 TRANSFAC yes 118242664
chr1 19276317 19276322 USF2 TRANSFAC yes 118242665
chr1 19276317 19276324 USF1 JASPAR yes 27165149
chr1 19276317 19276324 USF1 JASPAR yes 118242666
chr1 19276320 19276330 ZNF740 JASPAR yes 27165150
chr1 19276320 19276330 ZNF740 JASPAR yes 118242667
chr1 19276321 19276336 NR2C2 JASPAR yes 27165151
chr1 19276321 19276336 NR2C2 JASPAR yes 118242668
chr1 19276322 19276336 PLAG1 JASPAR yes 27165152
chr1 19276322 19276336 PLAG1 JASPAR yes 118242669
chr1 19276323 19276333 SP1 JASPAR yes 27165153
chr1 19276323 19276333 SP1 JASPAR yes 118242670
chr1 19276324 19276334 SP1 JASPAR yes 27165154
chr1 19276324 19276334 SP1 JASPAR yes 118242671
chr1 19276325 19276330 ETS2 TRANSFAC yes 27165155
chr1 19276325 19276330 ETS2 TRANSFAC yes 118242672
chr1 19276341 19276352 GCM1 JASPAR yes 27165156
chr1 19276341 19276352 GCM1 JASPAR yes 118242673
chr1 19276342 19276352 GCM2 JASPAR yes 27165157
chr1 19276342 19276352 GCM2 JASPAR yes 118242674
chr1 19276346 19276356 ELK1 JASPAR yes 27165158
chr1 19276346 19276356 ELK3 JASPAR yes 27165159
chr1 19276346 19276356 ERF JASPAR yes 27165160
chr1 19276346 19276356 ERG JASPAR yes 27165161
chr1 19276346 19276356 ETS1 JASPAR yes 27165162
chr1 19276346 19276356 ETV1 JASPAR yes 27165163
chr1 19276346 19276356 ETV3 JASPAR yes 27165164
chr1 19276346 19276356 ETV4 JASPAR yes 27165165
chr1 19276346 19276356 ETV5 JASPAR yes 27165166
chr1 19276346 19276356 FEV JASPAR yes 27165167
chr1 19276346 19276356 FLI1 JASPAR yes 27165168
chr1 19276346 19276356 ELK1 JASPAR yes 118242675
chr1 19276346 19276356 ELK3 JASPAR yes 118242676
chr1 19276346 19276356 ERF JASPAR yes 118242677
chr1 19276346 19276356 ERG JASPAR yes 118242678
chr1 19276346 19276356 ETS1 JASPAR yes 118242679
chr1 19276346 19276356 ETV1 JASPAR yes 118242680
chr1 19276346 19276356 ETV3 JASPAR yes 118242681
chr1 19276346 19276356 ETV4 JASPAR yes 118242682
chr1 19276346 19276356 ETV5 JASPAR yes 118242683
chr1 19276346 19276356 FEV JASPAR yes 118242684
chr1 19276346 19276356 FLI1 JASPAR yes 118242685
chr1 19276346 19276357 ETV2 JASPAR yes 27165169
chr1 19276346 19276357 SPDEF JASPAR yes 27165170
chr1 19276346 19276357 ETV2 JASPAR yes 118242686
chr1 19276346 19276357 SPDEF JASPAR yes 118242687
chr1 19276347 19276356 ELK4 JASPAR yes 27165171
chr1 19276347 19276356 ELK4 JASPAR yes 118242688
chr1 19276359 19276375 RFX5 JASPAR yes 27165172
chr1 19276359 19276375 RFX5 JASPAR yes 118242689
chr1 19276362 19276368 NFIC JASPAR yes 27165173
chr1 19276362 19276368 NFIC JASPAR yes 118242690
chr1 19276375 19276381 SP1 TRANSFAC yes 27165174
chr1 19276375 19276381 SP1 TRANSFAC yes 118242691
chr1 19276375 19276385 SP1 JASPAR yes 27165175
chr1 19276375 19276385 SP1 JASPAR yes 118242692
chr1 19276383 19276393 TEAD1 JASPAR yes 27165176
chr1 19276383 19276393 TEAD4 JASPAR yes 27165177
chr1 19276383 19276393 TEAD1 JASPAR yes 118242693
chr1 19276383 19276393 TEAD4 JASPAR yes 118242694
chr1 19276383 19276395 TEAD1 JASPAR yes 27165178
chr1 19276383 19276395 TEAD1 JASPAR yes 118242695
chr1 19276384 19276392 TEAD3 JASPAR yes 27165179
chr1 19276384 19276392 TEAD3 JASPAR yes 118242696
chr1 19276387 19276394 SPIB JASPAR yes 27165180
chr1 19276387 19276394 SPIB JASPAR yes 118242697
chr1 19276397 19276402 ETS2 TRANSFAC yes 27165181
chr1 19276397 19276402 ETS2 TRANSFAC yes 118242698
chr1 19276410 19276422 PKNOX1 JASPAR yes 27165182
chr1 19276410 19276422 PKNOX2 JASPAR yes 27165183
chr1 19276410 19276422 TGIF1 JASPAR yes 27165184
chr1 19276410 19276422 TGIF2 JASPAR yes 27165185
chr1 19276410 19276422 PKNOX1 JASPAR yes 118242699
chr1 19276410 19276422 PKNOX2 JASPAR yes 118242700
chr1 19276410 19276422 TGIF1 JASPAR yes 118242701
chr1 19276410 19276422 TGIF2 JASPAR yes 118242702
chr1 19276411 19276421 TFAP4 JASPAR yes 27165186
chr1 19276411 19276421 TFAP4 JASPAR yes 118242703
chr1 19276416 19276420 NFE TRANSFAC yes 27165187
chr1 19276416 19276420 NFE TRANSFAC yes 118242704
chr1 19276416 19276429 SMAD2 JASPAR yes 27165188
chr1 19276416 19276429 SMAD2 JASPAR yes 118242705
chr1 19276419 19276440 ZNF263 JASPAR yes 27165189
chr1 19276419 19276440 ZNF263 JASPAR yes 118242706
chr1 19276424 19276435 FLI1 JASPAR yes 27165190
chr1 19276424 19276435 FLI1 JASPAR yes 118242707
chr1 19276424 19276438 STAT1 JASPAR yes 27165191
chr1 19276424 19276438 STAT1 JASPAR yes 118242708
chr1 19276425 19276439 SPI1 JASPAR yes 27165192
chr1 19276425 19276439 SPIC JASPAR yes 27165193
chr1 19276425 19276439 SPI1 JASPAR yes 118242709
chr1 19276425 19276439 SPIC JASPAR yes 118242710
chr1 19276428 19276433 ETS2 TRANSFAC yes 27165194
chr1 19276428 19276433 ETS2 TRANSFAC yes 118242711
chr1 19276428 19276443 PRDM1 JASPAR yes 27165195
chr1 19276428 19276443 PRDM1 JASPAR yes 118242712
chr1 19276454 19276460 SP1 TRANSFAC yes 27165196
chr1 19276454 19276460 SP1 TRANSFAC yes 118242713
chr1 19276454 19276464 SP1 JASPAR yes 27165197
chr1 19276454 19276464 SP1 JASPAR yes 118242714
chr1 19276464 19276479 TFAP2A JASPAR yes 27165198
chr1 19276464 19276479 TFAP2A JASPAR yes 118242715
chr1 19276465 19276476 TFAP2A JASPAR yes 27165199
chr1 19276465 19276476 TFAP2B JASPAR yes 27165200
chr1 19276465 19276476 TFAP2C JASPAR yes 27165201
chr1 19276465 19276476 TFAP2A JASPAR yes 118242716
chr1 19276465 19276476 TFAP2B JASPAR yes 118242717
chr1 19276465 19276476 TFAP2C JASPAR yes 118242718
chr1 19276498 19276504 MZF1 JASPAR yes 27165202
chr1 19276498 19276504 MZF1 JASPAR yes 118242719
chr1 19276510 19276519 HIC2 JASPAR yes 27165203
chr1 19276510 19276519 HIC2 JASPAR yes 118242720
chr1 19276511 19276517 NFIC JASPAR yes 27165204
chr1 19276511 19276517 NFIC JASPAR yes 118242721
chr1 19276528 19276540 TEF JASPAR yes 27165205
chr1 19276528 19276540 TEF JASPAR yes 118242722
chr1 19276542 19276556 EBF1 JASPAR yes 27165206
chr1 19276542 19276556 EBF1 JASPAR yes 118242723
SNP sites on vista597[chr1:19276270-19276542]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 19276289 rs144942067 G A no 128392
chr1 19276323 rs148645634 G A
NR2C2 PLAG1 SP1 USF1 ZNF740
128393
chr1 19276340 rs28367561 G A no 128394
chr1 19276379 rs4912113 C T
SP1
128395
chr1 19276472 rs555670063 A G
TFAP2A TFAP2B TFAP2C
128396
chr1 19276505 rs117470401 G A no 128397
Genes possibly regulated by vista597[chr1:19276270-19276542]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 19166093 19186176 - TAS1R2 ENSG00000179002.5 19186176 0.94 1.0 252 9906
chr1 19175767 19247615 - RP13-279N23.2 ENSG00000255275.3 19247615 0.98 0.94 253 71345
chr1 19197926 19229275 - ALDH4A1 ENSG00000159423.12 19229275 0.95 0.98 254 53005
chr1 19230775 19283180 - IFFO2 ENSG00000169991.6 19283180 0.83 0.99 255 93362
Expression level of Genes
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miRNAs possibly regulated by vista597[chr1:19276270-19276542]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results