EnhancerDB
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  3. rs148645634[chr1:19276323]
Enhancers that have rs148645634[chr1:19276323]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 19276270 19276542 vista597
VISTA
Transcript factors that have rs148645634[chr1:19276323]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19276000 19276410 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107802288
chr1 19276317 19276324 USF1 JASPAR yes 27165149
chr1 19276317 19276324 USF1 JASPAR yes 118242666
chr1 19276320 19276330 ZNF740 JASPAR yes 27165150
chr1 19276320 19276330 ZNF740 JASPAR yes 118242667
chr1 19276321 19276336 NR2C2 JASPAR yes 27165151
chr1 19276321 19276336 NR2C2 JASPAR yes 118242668
chr1 19276322 19276336 PLAG1 JASPAR yes 27165152
chr1 19276322 19276336 PLAG1 JASPAR yes 118242669
chr1 19276323 19276333 SP1 JASPAR yes 27165153
chr1 19276323 19276333 SP1 JASPAR yes 118242670
Genes associated with rs148645634[chr1:19276323], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More