EnhancerDB
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  3. rs28367561[chr1:19276340]
Enhancers that have rs28367561[chr1:19276340]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 19276270 19276542 vista597
VISTA
Transcript factors that have rs28367561[chr1:19276340]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19276000 19276410 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107802288
Genes associated with rs28367561[chr1:19276340], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 19230775 19283180 - IFFO2 ENSG00000169991.6 19283180 0 Heart 0.0229237 255