EnhancerDB
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  3. rs555670063[chr1:19276472]
Enhancers that have rs555670063[chr1:19276472]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 19276270 19276542 vista597
VISTA
Transcript factors that have rs555670063[chr1:19276472]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19276464 19276479 TFAP2A JASPAR yes 27165198
chr1 19276464 19276479 TFAP2A JASPAR yes 118242715
chr1 19276465 19276476 TFAP2A JASPAR yes 27165199
chr1 19276465 19276476 TFAP2B JASPAR yes 27165200
chr1 19276465 19276476 TFAP2C JASPAR yes 27165201
chr1 19276465 19276476 TFAP2A JASPAR yes 118242716
chr1 19276465 19276476 TFAP2B JASPAR yes 118242717
chr1 19276465 19276476 TFAP2C JASPAR yes 118242718
Genes associated with rs555670063[chr1:19276472], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More