EnhancerDB
  1. Home
  2. SNP
  3. rs10047116[chr1:218638291]
Enhancers that have rs10047116[chr1:218638291]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 218626305 218642655 enh27510
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs10047116[chr1:218638291]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 218638278 218638293 TFAP2A JASPAR yes 35382136
chr1 218638278 218638293 TFAP2C JASPAR yes 35382137
chr1 218638279 218638292 TFAP2A JASPAR yes 35382138
chr1 218638279 218638292 TFAP2B JASPAR yes 35382139
chr1 218638280 218638293 TFAP2A JASPAR yes 35382140
chr1 218638280 218638293 TFAP2B JASPAR yes 35382141
chr1 218638280 218638293 TFAP2C JASPAR yes 35382142
chr1 218638283 218638294 EBF1 JASPAR yes 35382143
chr1 218638290 218638295 GATA2 JASPAR yes 35382144
Genes associated with rs10047116[chr1:218638291], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More