EnhancerDB
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  3. rs10080740[chr6:12327721]
Enhancers that have rs10080740[chr6:12327721]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12317105 12339155 enh23034
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Blood (GM12878) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs10080740[chr6:12327721]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12327700 12327721 IRF1 JASPAR yes 99961090
chr6 12327704 12327725 IRF1 JASPAR yes 99961092
chr6 12327705 12327726 IRF1 JASPAR yes 99961094
chr6 12327709 12327723 STAT1 JASPAR yes 99961095
chr6 12327709 12327724 STAT2 JASPAR yes 99961096
chr6 12327710 12327725 FOXP1 JASPAR yes 99961097
chr6 12327710 12327731 IRF1 JASPAR yes 99961098
chr6 12327711 12327722 FOXA1 JASPAR yes 99961099
chr6 12327712 12327723 FOXC1 JASPAR yes 99961100
chr6 12327712 12327724 FOXC2 JASPAR yes 99961101
chr6 12327712 12327727 IRF9 JASPAR yes 99961102
chr6 12327712 12327732 RREB1 JASPAR yes 99961103
chr6 12327713 12327724 FOXP2 JASPAR yes 99961104
chr6 12327713 12327727 IRF7 JASPAR yes 99961105
chr6 12327714 12327728 STAT1 JASPAR yes 99961106
chr6 12327714 12327729 STAT2 JASPAR yes 99961107
chr6 12327715 12327724 SRY JASPAR yes 99961108
chr6 12327715 12327727 IRF1 JASPAR yes 99961109
chr6 12327715 12327730 FOXP1 JASPAR yes 99961110
chr6 12327715 12327736 IRF1 JASPAR yes 99961111
chr6 12327717 12327737 RREB1 JASPAR yes 99961112
chr6 12327720 12327732 IRF1 JASPAR yes 99961113
chr6 12327720 12327735 FOXP1 JASPAR yes 99961114
chr6 12327720 12327741 IRF1 JASPAR yes 99961115
Genes associated with rs10080740[chr6:12327721], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More